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Tric_rubr_MR1459_V1

Organism name:
Trichophyton rubrum MR1459 (ascomycete fungi)
Infraspecific name:
Strain: MR1459
BioSample:
SAMN01091674
BioProject:
PRJNA186839
Submitter:
Broad Institute
Date:
2014/04/08
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000616945.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AOLC01
Assembly method:
allpaths v. R42874
Genome coverage:
109.0x
Sequencing technology:
Illumina

IDs: 148741 [UID] 1007748 [GenBank]

See Genome Information for Trichophyton rubrum

Pathogen Detection Resources

There are 25 assemblies for this organism

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History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length23,162,587
Total ungapped length23,162,577
Gaps between scaffolds0
Number of scaffolds486
Scaffold N50157,210
Scaffold L5041
Number of contigs487
Contig N50157,210
Contig L5041
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)487

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced23,162,58748623,162,577157,21010