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PRJEB4971_assembly_1

Organism name:: Bartonella henselae (a-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: BM1374163
BioSample:: SAMEA3138985
BioProject:: PRJEB4971
Submitter:: ebi
Date:: 2014/04/01
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_000612965.1 (latest)
RefSeq assembly accession:: GCF_000612965.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Genome coverage:: 87x

IDs: 142491 [UID] 995278 [GenBank] 1496488 [RefSeq]

See Genome Information for Bartonella henselae

Pathogen Detection Resources

There are 55 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000612965.1	=	GCF_000612965.1	PRJEB4971_assembly_1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::04/24/2023 01:59:08
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,628
CDSs (total)::1,576
Genes (coding)::1,481
CDSs (with protein)::1,481
Genes (RNA)::52
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::42
ncRNAs::4
Pseudo Genes (total)::95
CDSs (without protein)::95
Pseudo Genes (ambiguous residues)::0 of 95
Pseudo Genes (frameshifted)::75 of 95
Pseudo Genes (incomplete)::60 of 95
Pseudo Genes (internal stop)::45 of 95
Pseudo Genes (multiple problems)::60 of 95
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	1,905,383
Total ungapped length	1,905,383
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	99.74	99.95	96.98
Best-match type	99.74	99.95	96.98

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PRJEB4971_assembly_1

See Genome Information for Bartonella henselae

Pathogen Detection Resources

There are 55 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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