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Source database (GenBank or RefSeq) File type

HSIVP1_1.0

Organism name:: Veillonella parvula HSIVP1 (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: HSIVP1
BioSample:: SAMN02471223
BioProject:: PRJNA196131
Submitter:: Top Institute Food and Nutrition (TIFN)
Date:: 2013/08/26
Assembly type:: na
Assembly level:: Chromosome
Genome representation:: full
GenBank assembly accession:: GCA_000448705.1 (latest)
RefSeq assembly accession:: GCF_000448705.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ASKE01
Assembly method:: Celera Assembler v. 6.1; SSPACE v. 1.1
Genome coverage:: 476.0x
Sequencing technology:: 454; Illumina HiSeq

IDs: 53621 [UID] 764988 [GenBank] 802808 [RefSeq]

See Genome Information for Veillonella parvula

Pathogen Detection Resources

There are 128 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000448705.1	=	GCF_000448705.1	HSIVP1_1.0	Chromosome	Latest GenBank, Latest RefSeq

Comment

Bacteria and source DNA available from Bartholomeus van den Bogert, Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands

Global statistics

Total sequence length	2,177,985
Total ungapped length	2,144,848
Gaps between scaffolds	0
Number of scaffolds	1
Scaffold N50	2,177,985
Scaffold L50	1
Number of contigs	27
Contig N50	171,202
Contig L50	3
Total number of chromosomes and plasmids	1
Number of component sequences (WGS or clone)	27

	ANI	Query coverage	Subject coverage
Declared type	96.47	89.29	88.52
Best-match type	96.47	89.29	88.52

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HSIVP1_1.0

See Genome Information for Veillonella parvula

Pathogen Detection Resources

There are 128 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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