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MGS146

Organism name:
Eubacterium sp. CAG:146 (firmicutes)
Taxonomy check:
Inconclusive
BioSample:
SAMEA3138472
BioProject:
PRJEB722
Submitter:
DTU
Date:
2013/07/17
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_000431695.1 (latest)
RefSeq assembly accession:
GCF_000431695.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAXQ01
Genome coverage:
16x

IDs: 41651 [UID] 738668 [GenBank] 790448 [RefSeq]

See Genome Information for Eubacterium sp. CAG:146

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length2,653,983
Total ungapped length2,649,306
Gaps between scaffolds0
Number of scaffolds173
Scaffold N5034,633
Scaffold L5023
Number of contigs272
Contig N5020,272
Contig L5037
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)272

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,653,9831732,649,30634,633990

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Eubacterium sp. CAG:146Eubacterium sp. CAG:146

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000173975.1Anaerobutyricum halliisuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.3748.0938.72

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna