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ASM42721v1

Organism name:
Mesomycoplasma hyopneumoniae 7422 (bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 7422
BioSample:
SAMN02603242
BioProject:
PRJNA47327
Submitter:
Genesul
Date:
2013/07/15
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000427215.1 (latest)
RefSeq assembly accession:
GCF_000427215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 41021 [UID] 734408 [GenBank] 751058 [RefSeq]

See Genome Information for Mesomycoplasma hyopneumoniae

There are 26 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/26/2024 15:57:22
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::737
CDSs (total)::701
Genes (coding)::683
CDSs (with protein)::683
Genes (RNA)::36
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::31
ncRNAs::2
Pseudo Genes (total)::18
CDSs (without protein)::18
Pseudo Genes (ambiguous residues)::2 of 18
Pseudo Genes (frameshifted)::10 of 18
Pseudo Genes (incomplete)::7 of 18
Pseudo Genes (internal stop)::0 of 18
Pseudo Genes (multiple problems)::1 of 18
##Genome-Annotation-Data-END##

Global statistics

Total sequence length898,495
Total ungapped length898,495
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000427225.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP003802.1=NC_021831.1

Assembly statistics

MoleculeTotal
Length
Chromosome 898,495

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Mesomycoplasma hyopneumoniae 7422Mesomycoplasma hyopneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000008205.1Mesomycoplasma hyopneumoniae Jtype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000008205.1Mesomycoplasma hyopneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.4294.5794.68
Best-match type98.4294.5794.68

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna