U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM24527v2

Organism name:
Sulfolobus islandicus M.16.47 (crenarchaeotes)
Taxonomy check:
OK
Infraspecific name:
Strain: M.16.47
BioSample:
SAMN02471811
BioProject:
PRJNA80907
Submitter:
University of Illinois
Date:
2012/01/25
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000245275.2 (latest)
RefSeq assembly accession:
GCF_000245275.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AHJT01
Assembly method:
GS De Novo Assembler v. 2.0.00; Consed v. 19
Genome coverage:
48.5x
Sequencing technology:
454 Life Sciences GS-FLX

IDs: 614408 [UID] 332328 [GenBank] 614408 [RefSeq]

See Genome Information for Sulfolobus islandicus

There are 25 assemblies for this organism

See more

History (Show revision history)

Comment

Source DNA available from Rachel Whitaker, 601 S Goodwin Ave, Urbana, IL 61801. 
Reference-guided assembly based on Sulfolobus islandicus M1627 (Accession: NC_012632.1)

Global statistics

Total sequence length2,637,559
Total ungapped length2,637,559
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000245285.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AHJT01000001.1=NZ_AHJT01000001.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,637,559

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Sulfolobus islandicus M.16.47Sulfolobus islandicus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000022485.1Sulfolobus islandicus Y.N.15.51reftype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000022485.1Sulfolobus islandicusreftype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.6086.5679.98
Best-match type98.6086.5679.98

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna