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Source database (GenBank or RefSeq) File type

ASM23819v1

Organism name:: Brucella canis HSK A52141 (a-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: A52141
BioSample:: SAMN02603578
BioProject:: PRJNA74683
Submitter:: Macrogen
Date:: 2011/12/15
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000238195.1 (latest)
RefSeq assembly accession:: GCF_000238195.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes

IDs: 355868 [UID] 320838 [GenBank] 355868 [RefSeq]

See Genome Information for Brucella canis

Pathogen Detection Resources

There are 29 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000238195.1	=	GCF_000238195.1	ASM23819v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::05/12/2023 01:04:36
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,145
CDSs (total)::3,077
Genes (coding)::2,937
CDSs (with protein)::2,937
Genes (RNA)::68
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::55
ncRNAs::4
Pseudo Genes (total)::140
CDSs (without protein)::140
Pseudo Genes (ambiguous residues)::0 of 140
Pseudo Genes (frameshifted)::89 of 140
Pseudo Genes (incomplete)::26 of 140
Pseudo Genes (internal stop)::40 of 140
Pseudo Genes (multiple problems)::14 of 140
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	3,277,512
Total ungapped length	3,277,512
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome 1	CP003174.1	=	NC_016778.1
Chromosome 2	CP003175.1	=	NC_016796.1

Molecule	Total Length
All	3,277,512
Chromosome 1	2,107,023
Chromosome 2	1,170,489

	ANI	Query coverage	Subject coverage
Declared type	99.98	99.96	98.90
Best-match type	99.65	98.49	97.97

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ASM23819v1

See Genome Information for Brucella canis

Pathogen Detection Resources

There are 29 assemblies for this organism

History (Show revision history)

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Genome-Annotation-Data

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