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Source database (GenBank or RefSeq) File type

ASM17995v1

Organism name:: Lactobacillus iners LEAF 2052A-d (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: LEAF 2052A-d
BioSample:: SAMN00115041
BioProject:: PRJNA52043
Submitter:: J. Craig Venter Institute
Date:: 2010/11/04
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000179955.1 (latest)
RefSeq assembly accession:: GCF_000179955.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AEKI01
Assembly method:: Newbler v. 2.3
Genome coverage:: 75x
Sequencing technology:: 454

IDs: 235638 [UID] 227358 [GenBank] 235638 [RefSeq]

See Genome Information for Lactobacillus iners

Pathogen Detection Resources

There are 386 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000179955.1	=	GCF_000179955.1	ASM17995v1	Contig	Latest GenBank, Latest RefSeq

Comment

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC
Product names were updated in June 2013

Global statistics

Total sequence length	1,322,320
Total ungapped length	1,322,320
Number of contigs	28
Contig N50	86,505
Contig L50	6
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	28

	ANI	Query coverage	Subject coverage
Declared type	98.66	89.59	93.33
Best-match type	98.66	89.59	93.33

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ASM17995v1

See Genome Information for Lactobacillus iners

Pathogen Detection Resources

There are 386 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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