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Bact_sp_3_2_5_V2

Organism name:
Bacteroides sp. 3_2_5 (CFB group bacteria)
Infraspecific name:
Strain: 3_2_5
BioSample:
SAMN02463693
Submitter:
Broad Institute
Date:
2012/04/11
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000159855.2 (latest)
RefSeq assembly accession:
GCF_000159855.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACIB02
Assembly method:
Newbler v. 2.0.0-PreRelease-04/10/2008
Genome coverage:
35x
Sequencing technology:
454

IDs: 395498 [UID] 395478 [GenBank] 395498 [RefSeq]

See Genome Information for Bacteroides sp. 3_2_5

History (Show revision history)

Comment

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.
Source DNA provided by Strauss, J.C., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, ... N1G 2W1, Canada).
Bacteria provided by Strauss, J.C., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). 
Please be aware that the annotation is done automatically with little or no manual curation.
Gene Calling Method: Prodigal.  more

Global statistics

Total sequence length5,116,282
Total assembly gap length1,200
Gaps between scaffolds0
Number of scaffolds5
Scaffold N503,253,542
Scaffold L501
Number of contigs17
Contig N50392,151
Contig L505
Total number of chromosomes and plasmids0

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Global assembly definition

Download the full sequence report
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,116,28255,115,0823,253,542120