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ASM15933v1

Organism name:
Lactobacillus jensenii JV-V16
Infraspecific name:
Strain: JV-V16
BioSample:
SAMN00001502
Submitter:
Baylor College of Medicine
Date:
2010/06/17
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000159335.1 (latest)
RefSeq assembly accession:
GCF_000159335.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACGQ02
Assembly method:
Newbler Assembler v. 1.1.03.24
Genome coverage:
49x
Sequencing technology:
454

IDs: 189458 [UID] 189438 [GenBank] 189458 [RefSeq]

See Genome Information for Lactobacillus jensenii

There are 13 assemblies for this organism

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History (Show revision history)

Comment

Lactobacillus jensenii JV-V16

Strain source, body site: Urogenital tract, Vagina

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.

 Source DNA provided by J. Versalovic (Department of Pathology, Texas Children's ... Hospital, 1102 Bates Avenue, Suite 830, Feigin Center, Houston, TX, 77030, USA). Funded by "Genomes and Genetics at BCM-HGSC" (U54 HG003273).  more

Global statistics

Total sequence length1,604,632
Total assembly gap length3,798
Number of contigs2
Contig N50832,947
Contig L501
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Assembly Unit: Primary Assembly (GCF_000159345.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CM000953.1=NZ_CM000953.1

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Chromosome 1,604,63211,600,8341,604,63220