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ASM2250v1

Organism name:
Bacillus cereus 03BB102 (firmicutes)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 03BB102
BioSample:
SAMN02603930
BioProject:
PRJNA31307
Submitter:
The J. Craig Venter Institute
Date:
2009/03/30
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000022505.1 (latest)
RefSeq assembly accession:
GCF_000022505.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 43448 [UID] 23308 [GenBank] 43448 [RefSeq]

See Genome Information for Bacillus cereus

There are 2514 assemblies for this organism

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History (Show revision history)

Comment

DNA Source: Paul Jackson, jackson80@llnl.gov
The NIAID funded Bioinformatics Resource Center PathoSystems Resource Integration Center (PATRIC; http://patricbrc.vbi.vt.edu/ <http://patricbrc.vbi.vt.edu/>) is responsible for annotation updates of this record.
The authors wish to acknowledge the Intelligence Technology Innovation Center for funding the sequencing and ... the NIH/NIAID for funding the annotation at the Pathema Bioinformatics Resource Center.
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/15/2024 02:50:49
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,664
CDSs (total)::5,512
Genes (coding)::5,342
CDSs (with protein)::5,342
Genes (RNA)::152
rRNAs::14, 14, 14 (5S, 16S, 23S)
complete rRNAs::14, 14, 14 (5S, 16S, 23S)
tRNAs::105
ncRNAs::5
Pseudo Genes (total)::170
CDSs (without protein)::170
Pseudo Genes (ambiguous residues)::0 of 170
Pseudo Genes (frameshifted)::89 of 170
Pseudo Genes (incomplete)::102 of 170
Pseudo Genes (internal stop)::51 of 170
Pseudo Genes (multiple problems)::57 of 170
##Genome-Annotation-Data-END##

Global statistics

Total sequence length5,449,308
Total ungapped length5,449,308
Total number of chromosomes and plasmids2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000022515.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP001407.1=NC_012472.1
Plasmid p03BB102_179CP001406.1=NC_012473.1

Assembly statistics

MoleculeTotal
Length
All5,449,308
Chromosome 5,269,628
Plasmid p03BB102_179179,680

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus cereus 03BB102Bacillus cereus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_006094295.1Bacillus cereus ATCC 14579type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022221345.1Bacillus anthracistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type91.8879.8780.13
Best-match type97.5489.3088.37

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna