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ASM1184v1

Organism name:
Streptococcus thermophilus CNRZ1066 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: CNRZ1066
BioSample:
SAMN02603344
BioProject:
PRJNA13163
Submitter:
Institut National de la Recherche Agronomique, France
Date:
2004/11/15
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000011845.1 (latest)
RefSeq assembly accession:
GCF_000011845.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 32948 [UID] 12648 [GenBank] 32948 [RefSeq]

See Genome Information for Streptococcus thermophilus

There are 543 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/22/2023 13:33:05
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.4
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,895
CDSs (total)::1,806
Genes (coding)::1,604
CDSs (with protein)::1,604
Genes (RNA)::89
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::67
ncRNAs::4
Pseudo Genes (total)::202
CDSs (without protein)::202
Pseudo Genes (ambiguous residues)::0 of 202
Pseudo Genes (frameshifted)::142 of 202
Pseudo Genes (incomplete)::72 of 202
Pseudo Genes (internal stop)::88 of 202
Pseudo Genes (multiple problems)::85 of 202
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,796,226
Total ungapped length1,796,226
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000011855.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP000024.1=NC_006449.1

Assembly statistics

MoleculeTotal
Length
Chromosome 1,796,226

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus thermophilus CNRZ1066Streptococcus thermophilus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_010120595.1Streptococcus thermophilustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_010120595.1Streptococcus thermophilustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.5692.2778.84
Best-match type98.5692.2778.84

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna