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In this issue

Entrez Programming Utilities (E-Utils)

PubChem

GenePlot

New NLM Catalog in Entrez

New Genome Builds

New Microbial Genomes in GenBank

Whole Genome Shotgun Project

Web BLAST

Trace Archive Grows

New Organisms in UniGene

RefSeq Version 8

Submissions Corner

Predicted Records

GenBank Release 144

BLAST 2.2.10

Publications

Masthead





Change in Definition Lines for Predicted Records

The label "PREDICTED" has been added to the title of RNA records with accessions beginning with "XM_" and "XR_" and to the title of protein accessions beginning with "XP_" to indicate that these sequences are derived from genomic placements and not directly from a cDNA. The label "PREDICTED" does not indicate that the gene itself is predicted, although it may be. The "PREDICTED" label appears in the definition lines seen in retrievals from Entrez , as shown below, and in BLAST results.

 

GenBank format in Entrez:
LOCUS XM_038604 4998 bp mRNA linear PRI 23-AUG-2004
DEFINITION PREDICTED: Homo sapiens unc-13 homolog A (C. elegans) (UNC13A), mRNA.


Sequences producing significant alignments:

Score
(bits)

E
Value

gi|51493417|ref|XM_038604.8| PREDICTED: Homo sapiens unc-13... 9610 ......0.0
       

 

Continue to: NLM Catalog

NCBI News | Fall/Winter 2002 NCBI News: Spring 2003