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An organized view of the transcripome



Library:19763 (dbEST ID)

CK01

Library Description

Organism:Drosophila melanogaster

No useful information provided.

Source: Karin Schmitt, Open Biosystems, Inc.

Gene Content Analysis

79,370 ESTs from this library were grouped into 9,502 UniGene entries (putative genes) [UniGene build #74, 26-Feb-2013]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
221 2784 Dm.7189 Squid.
165 2079 Dm.21465 Nervana 3.
145 1827 Dm.1709 Calcium/calmodulin-dependent protein kinase II.
131 1650 Dm.11710 Longitudinals lacking.
119 1499 Dm.1887 Calsyntenin-1.
114 1436 Dm.21258 CG43674 gene product from transcript CG43674-RF.
111 1399 Dm.20909 Complexin.
110 1386 Dm.1647 Retinoid- and fatty acid-binding glycoprotein.
107 1348 Dm.7301 CG10077 gene product from transcript CG10077-RA.
106 1336 Dm.2983 CG4993 gene product from transcript CG4993-RB.
103 1298 Dm.20227 Held out wings.
101 1273 Dm.19478 Synaptotagmin 1.
99 1247 Dm.2761 Myosin heavy chain.
97 1222 Dm.7041 G protein beta-subunit 13F.
96 1210 Dm.7394 No receptor potential A.
94 1184 Dm.7092 Fasciclin 1.
94 1184 Dm.3732 CG9821 gene product from transcript CG9821-RC.
94 1184 Dm.20385 Charybde.
92 1159 Dm.7069 PolyA-binding protein.
92 1159 Dm.17803 Pangolin.
92 1159 Dm.11889 Syncrip.
91 1147 Dm.3358 CG2999 gene product from transcript CG2999-RD.
90 1134 Dm.174 Extradenticle.
86 1084 Dm.1408 Plexin A.
85 1071 Dm.36751 TSA: Drosophila melanogaster isotig02841.Dmte mRNA sequence.
85 1071 Dm.19417 Hephaestus.
82 1033 Dm.3785 Plasma membrane calcium ATPase.
81 1021 Dm.577 Calmodulin.
80 1008 Dm.7398 Argonaute-1.
79 995 Dm.995 Ftz transcription factor 1.
78 983 Dm.6913 Pasilla.
78 983 Dm.3444 Shibire.
76 958 Dm.5892 Cut up.
76 958 Dm.1206 Heat shock protein cognate 4.
76 958 Dm.11452 CG8580 gene product from transcript CG8580-RD.
75 945 Dm.6733 Fasciclin 3.
75 945 Dm.2246 C-terminal Binding Protein.
74 932 Dm.5734 Purine-rich binding protein-alpha.
74 932 Dm.4502 Sex lethal.
74 932 Dm.20295 TSA: Drosophila melanogaster isotig01052.Dmte mRNA sequence.
74 932 Dm.12142 CG42748 gene product from transcript CG42748-RJ.
73 920 Dm.19116 Tropomyosin 1.
72 907 Dm.4079 Lipid storage droplet-2.
72 907 Dm.21599 CG33229 gene product from transcript CG33229-RA.
70 882 Dm.1390 Cyclin G.
69 869 Dm.6630 Eph receptor tyrosine kinase.
69 869 Dm.2931 Histone H3.3B.
69 869 Dm.2831 Echinoid.
69 869 Dm.21990 CG8639 gene product from transcript CG8639-RG.
68 857 Dm.6347 Lethal (3) neo38.
68 857 Dm.4473 Embryonic lethal abnormal vision.
68 857 Dm.1997 Heterogeneous nuclear ribonucleoprotein at 27C.
68 857 Dm.11144 Murashka.
67 844 Dm.6426 Brain tumor.
67 844 Dm.2166 Casein kinase Ialpha.
66 832 Dm.20407 Modifier of mdg4.
65 819 Dm.20885 CG31522 gene product from transcript CG31522-RF.
64 806 Dm.6723 Failed axon connections.
64 806 Dm.4843 Glycerol 3 phosphate dehydrogenase.
64 806 Dm.42 Silver.
64 806 Dm.13902 G protein alpha49B.
63 794 Dm.7093 Polychaetoid.
63 794 Dm.4457 Synapse-associated protein 47kD.
63 794 Dm.20858 Basigin.
63 794 Dm.1334 Musashi.
62 781 Dm.2784 Lethal (2) giant larvae.
62 781 Dm.1453 G protein gamma30A.
61 769 Dm.35454 Transcribed locus, moderately similar to XP_003541206.1 PREDICTED: uncharacterized protein LOC100788489 [Glycine max].
61 769 Dm.3341 CG1862 gene product from transcript CG1862-RC.
61 769 Dm.1526 Tramtrack.
60 756 Dm.7369 Pipsqueak.
60 756 Dm.6899 CG10596 gene product from transcript CG10596-RB.
60 756 Dm.20865 Quiver.
59 743 Dm.7082 Calcium/calmodulin-dependent protein kinase I.
59 743 Dm.2147 Extra macrochaetae.
59 743 Dm.1403 Gawky.
59 743 Dm.10449 CG11155 gene product from transcript CG11155-RD.
58 731 Dm.7773 Smooth.
58 731 Dm.3990 Nemo.
58 731 Dm.33423 Nicotinic Acetylcholine Receptor alpha 80B.
58 731 Dm.3189 Neurotactin.
58 731 Dm.3101 Excitatory amino acid transporter 1.
58 731 Dm.1594 PAR-domain protein 1.
57 718 Dm.5140 Cysteine string protein.
57 718 Dm.31263 CG31221 gene product from transcript CG31221-RA.
57 718 Dm.2596 Vasa intronic gene.
57 718 Dm.15438 CG43897 gene product from transcript CG43897-RL.
56 706 Dm.6911 Vacuolar H[+] ATPase subunit 16-1.
56 706 Dm.6725 Na pump alpha subunit.
56 706 Dm.33547 CG17698 gene product from transcript CG17698-RF.
56 706 Dm.29457 Elongation factor 1alpha48D.
56 706 Dm.1712 Lola like.
55 693 Dm.2918 NFAT homolog.
55 693 Dm.24822 Mustard.
55 693 Dm.2314 CG14989 gene product from transcript CG14989-RE.
54 680 Dm.7368 Dodeca-satellite-binding protein 1.
54 680 Dm.7020 S-adenosylmethionine Synthetase.
54 680 Dm.3811 Spoonbill.
54 680 Dm.3260 Ankyrin 2.
54 680 Dm.2272 Homothorax.

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Source: NCBI UniGene

EST Sequences

91,653 EST sequences from this library have been submitted to the public sequence database as of 26-Feb-2013.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • uncharacterized tissue
  • unknown developmental stage
  • uncharacterized preparation

Source: NCBI Clone Registry



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