Ornithine decarboxylase-2 (MGC52527)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:493515 UniGene Xl.8949 Xenopus laevis (African clawed frog) MGC52527

Order cDNA clone, Links

Ornithine decarboxylase-2 (MGC52527)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001079692.1	ornithine decarboxylase-2	X. laevis	100.0	455
NP_002530.1	ornithine decarboxylase 1	H. sapiens	73.5	438
NP_571876.1	ornithine decarboxylase 1	D. rerio	72.7	439
NP_038642.2	ornithine decarboxylase, structural 1	M. musculus	71.2	437
XP_326764.1	hypothetical protein	N. crassa	54.7	402
NP_504752.1	Ornithine DeCarboxylase family member (odc-1)	C. elegans	49.5	382
NP_477052.2	ornithine decarboxylase 1	D. melanogaster	48.8	375
XP_001697502.1	ornithine decarboxylase 1	C. reinhardtii	47.3	376
NP_012737.1	Ornithine decarboxylase, catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; Spe1p	S. cerevisiae	47.1	454

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	whole body; testis; ectoderm; fat body; skin; animal cap; kidney; head; endoderm; endomesoderm

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AF217544.2	Xenopus laevis ornithine decarboxylase-2 mRNA, complete cds	PAM
BC047954.1	Xenopus laevis ornithine decarboxylase-2, mRNA (cDNA clone MGC:52527 IMAGE:5542547), complete cds	PA
NM_001086223.1	Xenopus laevis ornithine decarboxylase-2 (MGC52527), mRNA	PA

EST sequences (10 of 191) [Show all sequences]

BG730936.1	Clone IMAGE:4203546	whole body	3' read	PA
BG552964.1	Clone IMAGE:4203546	whole body	5' read	P
BG554314.1	Clone IMAGE:4202728	whole body	5' read	PM
BG555146.1	Clone IMAGE:3549236	whole body	3' read	PA
BG577951.1	Clone IMAGE:3550111	whole body	5' read	P
BG578979.1	Clone IMAGE:3550300	whole body	5' read	PM
BG364088.1	Clone IMAGE:3403120	whole body	5' read	P
BG408425.1	Clone IMAGE:3405353	whole body	5' read	P
BG408636.1	Clone IMAGE:3405329	whole body	5' read	P
BG486511.1	Clone IMAGE:3405353	whole body	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria