Histone deacetylase 3 (hdac3)

NCBI

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Finding cDNAs

UGID:2525145 UniGene Xl.65911 Xenopus laevis (African clawed frog) hdac3

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Histone deacetylase 3 (hdac3)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001016883.1	histone deacetylase 3	X. tropicalis	98.4	427
NP_034541.2	histone deacetylase 3	M. musculus	96.0	427
NP_003874.2	histone deacetylase 3	H. sapiens	96.0	427
NP_957284.1	histone deacetylase 3	D. rerio	93.0	427
NP_651978.2	Hdac3	D. melanogaster	70.7	434
NP_001079396.1	similar to histone deacetylase 1	X. laevis	61.9	420
NP_014069.1	Histone deacetylase; regulates transcription and silencing; Rpd3p	S. cerevisiae	61.7	414
NP_190054.2	HDA9 (histone deacetylase 9); histone deacetylase	A. thaliana	61.5	418
XP_325004.1	hypothetical protein	N. crassa	60.9	422
XP_001695812.1	histone deacetylase	C. reinhardtii	60.0	398
NP_506599.1	Histone DeAcetylase family member (hda-1)	C. elegans	59.5	432

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	whole body; testis; ovary; endomesoderm

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

BC070873.1

Xenopus laevis Histone deacetylase 3, mRNA (cDNA clone IMAGE:6859192), partial cds

EST sequences (6)

BE680586.1	Clone IMAGE:3745844	whole body	5' read
BU899727.1	Clone IMAGE:6316390	ovary	5' read	P
CA787847.1	Clone IMAGE:6859192	whole body	5' read	P
CK799090.1	Clone IMAGE:7202811	testis	5' read	P
CN319117.1	Clone IMAGE:7202811	testis	3' read	P
DC041782.1	Clone xlk119g11ex	endomesoderm	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria