Phenylalanine-tRNA synthetase-like (farsl)

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Finding cDNAs

UGID:2522053 UniGene Xl.62819 Xenopus laevis (African clawed frog) farsl

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Phenylalanine-tRNA synthetase-like (farsl)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001080851.1	phenylalanine-tRNA synthetase-like	X. laevis	100.0	498
NP_001038760.2	phenylalanyl-tRNA synthetase, alpha subunit	D. rerio	83.9	496
NP_004452.1	phenylalanyl-tRNA synthetase, alpha subunit	H. sapiens	79.7	497
NP_079924.2	phenylalanyl-tRNA synthetase, alpha subunit	M. musculus	79.2	496
NP_572448.1	CG2263	D. melanogaster	69.3	492
NP_871804.1	phenylalanyl (F) tRNA Synthetase family member (frs-1)	C. elegans	66.5	483
XP_001694933.1	predicted protein	C. reinhardtii	64.8	497
NP_195639.2	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	A. thaliana	62.9	483
XP_324452.1	hypothetical protein	N. crassa	59.6	458
NP_116631.1	Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs1p to form active enzyme; evolutionarily distant from mitochondrial phenylalanyl-tRNA synthetase based on protein sequence, but substrate binding is similar; Frs2p	S. cerevisiae	55.6	498

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; brain; tail; kidney

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC054256.1	Xenopus laevis phenylalanine-tRNA synthetase-like, mRNA (cDNA clone MGC:64470 IMAGE:6881163), complete cds	PA
	NM_001087382.1	Xenopus laevis phenylalanine-tRNA synthetase-like (farsl), mRNA	PA

EST sequences (15)

AW460404.1	Clone IMAGE:2943073	whole body	5' read	P
AW460744.1	Clone IMAGE:2943073	whole body	3' read	PA
BG811224.1	Clone IMAGE:4740442	brain	3' read	A
CB208352.1	Clone IMAGE:6881163	whole body	5' read	P
CB562429.1	Clone IMAGE:6881163	whole body	3' read	P
CB944314.1	Clone IMAGE:6932523	whole body	5' read	A
CF286882.1	Clone IMAGE:5514493	whole body	5' read	P
CF521741.1	Clone IMAGE:7012003	kidney	5' read	P
BX852834.1	Clone IMAGp998D1110583_;_IMAGE:4740442	brain	5' read	P
EB476697.1	Clone IMAGE:8541627	tail	5' read	P
EC275821.1	Clone IMAGE:8541627	tail	3' read	P
DC085268.1	Clone rxl288p11		3' read	P
DC085548.1	Clone rxl289p11		3' read	P
DC120332.1	Clone xl289p11		5' read	P
DC120037.1	Clone xl288p11		5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria