MGC84017 protein (MGC84017)

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Finding cDNAs

UGID:491077 UniGene Xl.5745 Xenopus laevis (African clawed frog) MGC84017

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MGC84017 protein (MGC84017)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001087522.1	MGC84017 protein	X. laevis	100.0	359
NP_001003491.1	GDP-mannose pyrophosphorylase B	D. rerio	88.3	359
NP_808578.1	GDP-mannose pyrophosphorylase B	M. musculus	85.0	359
NP_068806.1	GDP-mannose pyrophosphorylase B isoform 2	H. sapiens	84.4	359
NP_649498.1	CG1129, isoform A	D. melanogaster	72.6	357
NP_502333.2	Temporarily Assigned Gene name family member (tag-335)	C. elegans	67.4	364
XP_325858.1	hypothetical protein ( (U89991) mannose-1-phosphate guanylyltransferase [Hypocrea jecorina] )	N. crassa	63.5	363
NP_181507.1	CYT1 (CYTOKINESIS DEFECTIVE 1); nucleotidyltransferase	A. thaliana	62.3	360
XP_001695916.1	GDP-D-mannose pyrophosphorylase	C. reinhardtii	61.9	359
NP_010228.1	GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure; Psa1p	S. cerevisiae	59.8	360

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; brain; thymus; endomesoderm; head

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC080059.1	Xenopus laevis MGC84017 protein, mRNA (cDNA clone MGC:84017 IMAGE:6946651), complete cds	PA
	NM_001094053.1	Xenopus laevis MGC84017 protein (MGC84017), mRNA	PA

EST sequences (10 of 30) [Show all sequences]

BG347918.1	Clone IMAGE:3517022	whole body	5' read	P
BG413731.1	Clone IMAGE:3517022	whole body	3' read	A
BE027009.1	Clone IMAGE:3300519	whole body	3' read	A
BM262067.1	Clone IMAGE:4783863	whole body	3' read
BM262374.1	Clone IMAGE:4783863	whole body	5' read	P
BJ081637.1	Clone XL076e09	whole body	3' read
BJ063430.1	Clone XL076e09	whole body	5' read	P
BI675307.1	Clone IMAGE:4084267	whole body	5' read	P
CB565741.1	Clone IMAGE:6874147	whole body	3' read	P
CD252964.1	Clone IMAGE:6946651	head	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria