Similar to UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)- galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T) (MGC53523)

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Finding cDNAs

UGID:505440 UniGene Xl.23527 Xenopus laevis (African clawed frog) MGC53523

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Similar to UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)- galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T) (MGC53523)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001079612.1	similar to UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)- galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T)	X. laevis	100.0	525
XP_001333429.1	PREDICTED: similar to beta-1,4-N-acetyl-galactosaminyl transferase 1	D. rerio	66.5	530
NP_001469.1	beta-1,4-N-acetyl-galactosaminyl transferase 1	H. sapiens	61.5	476
NP_082015.1	beta-1,4-N-acetyl-galactosaminyl transferase 1 isoform 2	M. musculus	60.0	482

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	whole body; ovary; spleen; testis; head

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC045131.1	Xenopus laevis similar to UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)- galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T), mRNA (cDNA clone MGC:53523 IMAGE:5572671), complete cds	PA
	NM_001086143.1	Xenopus laevis similar to UDP-N-acetyl-alpha-D-galactosamine:(N-acetylneuraminyl)- galactosylglucosylceramide N-acetylgalactosaminyltransferase (GalNAc-T) (MGC53523), mRNA	PA

EST sequences (12)

BQ732737.1	Clone IMAGE:5572671	whole body	5' read	P
BU900416.1	Clone IMAGE:6317198	ovary	5' read
BU900480.1	Clone IMAGE:6317278	ovary	5' read	P
CD301451.1	Clone IMAGE:6958326	head	5' read	P
CF270945.1	Clone IMAGE:5512066	spleen	5' read
BJ622481.1	Clone XL201c04	whole body	5' read	P
BJ639157.1	Clone XL201c04	whole body	3' read	P
BX843511.1	Clone IMAGp998O1812315_;_IMAGE:5571689	whole body	5' read	P
BX847158.1	Clone IMAGp998I2313750_;_IMAGE:6317278	ovary	5' read	P
CK797274.1	Clone IMAGE:7205370	testis	5' read	PA
CX132522.1	Clone IMAGE:7766698	testis	5' read	P
DC133101.1	Clone xl333h03		5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria