Hpd protein (hpd)

Restricted Expression:

liver [show more like this]

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

cDNA Sources:

liver; whole body; adipose tissue; testis

NCBI

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Finding cDNAs

UGID:672256 UniGene Str.8493 Xenopus tropicalis (western clawed frog) hpd

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Hpd protein (hpd)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001025588.1	hpd protein	X. tropicalis	100.0	393
NP_001083378.1	hypothetical protein LOC398893	X. laevis	96.5	312
NP_957461.1	4-hydroxyphenylpyruvate dioxygenase	D. rerio	84.8	386
NP_002141.1	4-hydroxyphenylpyruvate dioxygenase	H. sapiens	75.0	388
NP_032303.1	4-hydroxyphenylpyruvate dioxygenase	M. musculus	73.7	388
NP_730536.1	CG11796, isoform A	D. melanogaster	68.7	379
NP_499324.1	4-HydroxyPhenylpyruvate Dioxygenase (HPD) family member (hpd-1)	C. elegans	66.5	382
XP_328269.1	hypothetical protein	N. crassa	57.8	383

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC091035.1	Xenopus tropicalis hpd protein, mRNA (cDNA clone MGC:107914 IMAGE:7024220), complete cds	PA
	NM_001030417.1	Xenopus (Silurana) tropicalis hpd protein (hpd), mRNA	PA

EST sequences (10 of 47) [Show all sequences]

CF344393.1	Clone IMAGE:6999263	whole body	5' read	PM
CF344394.1	Clone IMAGE:6999263	whole body	5' read	P
CF375507.1	Clone IMAGE:7007200	whole body	3' read	PA
CF375508.1	Clone IMAGE:7007200	whole body	5' read	P
CF378170.1	Clone IMAGE:7005176	whole body	5' read	PM
CF524584.1	Clone IMAGE:7016786	whole body	5' read	PM
CF524903.1	Clone IMAGE:7016445	whole body	5' read	PM
CF590393.1	Clone IMAGE:7021912	whole body	5' read	PM
CF591175.1	Clone IMAGE:7022687	whole body	5' read	PM
CF592025.1	Clone IMAGE:7024781	whole body	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria