Hypothetical protein LOC548946 (LOC548946)

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UGID:1369289 UniGene Str.26858 Xenopus tropicalis (western clawed frog) LOC548946

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Hypothetical protein LOC548946 (LOC548946)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001016192.2	hypothetical protein LOC548946	X. tropicalis	100.0	468
NP_001084985.1	hypothetical protein LOC432047	X. laevis	90.0	468
NP_116223.3	asparagine-linked glycosylation 10 homolog (yeast, alpha-1,2-glucosyltransferase)	H. sapiens	64.3	472
NP_001028613.1	expressed sequence AU045404	M. musculus	64.1	473
XP_001919369.1	PREDICTED: similar to asparagine-linked glycosylation 10 homolog (yeast, alpha-1,2-glucosyltransferase)	D. rerio	61.7	472

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	whole body; brain; skin

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

CR761797.2	Xenopus tropicalis finished cDNA, clone TGas001k24	PA
NM_001016192.3	Xenopus (Silurana) tropicalis hypothetical protein LOC548946 (LOC548946), mRNA	PA
BC123914.1	Xenopus tropicalis hypothetical protein LOC548946, mRNA (cDNA clone MGC:145193 IMAGE:7653572), complete cds	PA

EST sequences (11)

AL594792.2	Clone TGas001k24	whole body	5' read	PM
AL646668.2	Clone TNeu028l21	whole body	5' read	P
AL875568.2	Clone TEgg137j01	whole body	5' read
AL890183.2	Clone TEgg089n02	whole body	5' read
CX363993.1	Clone IMAGE:7600784	whole body	3' read	A
CX431112.1	Clone IMAGE:7576195	whole body	3' read	P
CX431113.2	Clone IMAGE:7576195	whole body	5' read	P
CX822511.2	Clone IMAGE:7653572	brain	3' read	A
CX822512.1	Clone IMAGE:7653572	brain	5' read	P
DR892631.1	Clone IMAGE:7600784	whole body	5' read	P
DT428418.1	Clone IMAGE:7872639	skin	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria