Galactocerebrosidase (galc)

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Finding cDNAs

UGID:1082670 UniGene Str.13689 Xenopus tropicalis (western clawed frog) galc

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Galactocerebrosidase (galc)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001072270.1	hypothetical protein LOC779723	X. tropicalis	100.0	677
NP_998276.1	galactosylceramidase	D. rerio	71.7	639
NP_032105.2	galactosylceramidase	M. musculus	71.3	652
NP_000144.2	galactosylceramidase isoform a precursor	H. sapiens	70.7	676

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	stomach; intestine; thymus; limb; testis; head; adipose tissue; whole body; lung; brain; mixed

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC121269.1	Xenopus tropicalis hypothetical protein MGC145326, mRNA (cDNA clone MGC:145326 IMAGE:7671762), complete cds	PA
CU075464.1	Xenopus tropicalis finished cDNA, clone THdA032b04	PA
NM_001078802.1	Xenopus (Silurana) tropicalis hypothetical protein MGC145326 (MGC145326), mRNA	PA

EST sequences (10 of 39) [Show all sequences]

BX737600.1	Clone TTpA043l09	whole body	5' read	P
BX737601.1	Clone TTpA043l09	whole body	3' read	PA
CN084731.1	Clone xtbs24D15	mixed	3' read
CN084732.1	Clone xtbs24D15	mixed	5' read
CR429926.1	Clone TTbA035i21	whole body	5' read	P
CR430265.1	Clone TTbA035i21	whole body	3' read	PA
CR578406.1	Clone THdA032b04	head	5' read	P
CR578407.1	Clone THdA032b04	head	3' read	PA
CX311359.1	Clone XZT11267	whole body	3' read	P
CX311360.1	Clone XZT11267	whole body	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria