UB2D2 (LOC780418)

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UGID:3007832 UniGene Ssc.53827 Sus scrofa (pig) LOC780418

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UB2D2 (LOC780418)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001072141.1	UB2D2	S. scrofa	100.0	146
XP_001476589.1	PREDICTED: similar to Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme Ubch5b	M. musculus	99.3	146
NP_957253.1	ubiquitin-conjugating enzyme E2D 2	D. rerio	99.3	146
NP_001084434.1	ubiquitin conjugating enzyme E2	X. laevis	99.3	146
NP_003330.1	ubiquitin-conjugating enzyme E2D 2 isoform 1	H. sapiens	99.3	146
NP_731941.1	effete	D. melanogaster	98.0	146
NP_502065.1	LEThal family member (let-70)	C. elegans	96.6	146
NP_564828.1	ubiquitin-conjugating enzyme, putative	A. thaliana	83.7	147
XP_959933.2	hypothetical protein NCU02289	N. crassa	83.7	146
NP_009638.1	Ubiquitin-conjugating enzyme (E2), mediates degradation of short-lived and abnormal proteins; interacts with E3-CaM in ubiquitinating calmodulin; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; Ubc4p	S. cerevisiae	83.3	143
XP_001699308.1	ubiquitin conjugating enzyme	C. reinhardtii	79.6	147

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	muscle; trachea; testis; adipose tissue; blood; thyroid; intestine; uterus; ovary

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

UniSTS entry:

(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	DQ972955.1	Sus scrofa UB2D2 mRNA, complete cds	P
	NM_001078673.1	Sus scrofa UB2D2 (LOC780418), mRNA	P

EST sequences (10 of 21) [Show all sequences]

BP170693.1	Clone UTR010005C07	uterus	5' read	P
BP170694.1	Clone UTR010006C07	uterus	5' read	P
AJ647113.1	Clone C0003104_L23	ovary
CJ023804.1	Clone TCH01H070018	trachea	5' read	P
DV898944.1		muscle	3' read
DT329650.1	Clone 0141_0144_A18	adipose tissue	5' read
DV937181.1	Clone SS-T-2-3a-T3_P11	testis
EV868739.2		muscle	5' read	P
EV903955.2		blood	5' read
EV906832.2		blood	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria