Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain (ACADS)

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UGID:454104 UniGene Ssc.14531 Sus scrofa (pig) ACADS

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Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain (ACADS)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_999063.1	short-chain acyl-CoA dehydrogenase precursor	S. scrofa	100.0	412
NP_000008.1	short-chain acyl-CoA dehydrogenase precursor	H. sapiens	93.9	411
NP_031409.2	short-chain acyl-CoA dehydrogenase precursor	M. musculus	93.7	411
NP_001080869.1	short-chain acyl-CoA dehydrogenase	X. laevis	86.6	401
NP_001003743.1	short-chain acyl-CoA dehydrogenase	D. rerio	81.2	389
NP_650840.1	Arc42	D. melanogaster	77.6	378
NP_491859.1	Acyl CoA DeHydrogenase family member (acdh-3)	C. elegans	47.5	406
XP_326398.1	hypothetical protein	N. crassa	45.3	375

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	liver; adipose tissue; mixed; spleen; muscle; intestine; ovary; blood; embryonic tissue; testis; uterus; adrenal gland; skin; thyroid; thymus; brain; trachea; lymph node; eye; joint; uncharacterized tissue; placenta

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	UniSTS entry:		MARC_37681-37682:1072706878:1
	UniSTS entry:		MARC_38173-38174:1078340031:1
	UniSTS entry:		MARC_38171-38172:1075926088:1
	UniSTS entry:		MARC_37683-37684:1068647802:2
	UniSTS entry:		MARC_37689-38177:1078339255:1
	UniSTS entry:		MARC_37689-37690:1078339068:8
	UniSTS entry:		MARC_37687-37688:1078340533:14

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_213898.1	Sus scrofa acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain (ACADS), nuclear gene encoding mitochondrial protein, mRNA	PA
AK233365.1	Sus scrofa mRNA, clone:LVRM10130E03, expressed in liver	PA
D89477.1	Sus scrofa mRNA for short-chain acyl-CoA dehydrogenase, complete cds	PA

EST sequences (10 of 135) [Show all sequences]

CB469228.1		blood	5' read
CB476401.1		blood	5' read	P
CB483275.1		blood	3' read	P
CD572373.1	Clone PBL	brain	5' read	A
CF366424.1		mixed	5' read
CF367832.1		mixed	3' read	A
BX667611.2	Clone scac0026.b.24	mixed	5' read	P
BP161342.1	Clone THY010045B08	thymus	5' read	P
BP161416.1	Clone THY010009B09	thymus	5' read	P
BP167155.1	Clone THY010016G04	thymus	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria