| UGID:414192 UniGene Rn.60152 Rattus norvegicus (Norway rat) Etfb |
Order cDNA clone,
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Electron-transfer-flavoprotein, beta polypeptide (Etfb)
Norway rat protein-coding gene Etfb. Represented by 53 ESTs from 42 cDNA libraries. Corresponds to reference sequence NM_001004220.1. [UniGene 414192 - Rn.60152]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
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Etfb gene product |
R. norvegicus |
100.0 |
254 |
|
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Etfb gene product |
M. musculus |
97.7 |
254 |
|
|
electron transfer flavoprotein subunit beta isoform 1 |
H. sapiens |
94.5 |
254 |
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electron-transfer-flavoprotein, beta polypeptide |
X. laevis |
84.1 |
251 |
|
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etfb gene product |
D. rerio |
81.7 |
250 |
|
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CG7834, isoform A |
D. melanogaster |
74.5 |
250 |
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Electron transfer flavoprotein subunit beta |
A. thaliana |
67.2 |
250 |
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Protein F23C8.5 |
C. elegans |
64.9 |
251 |
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electron transfer flavoprotein beta subunit |
C. reinhardtii |
62.5 |
245 |
|
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electron transfer flavoprotein beta-subunit |
N. crassa |
59.0 |
255 |
|
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Cir1p |
S. cerevisiae |
52.1 |
256 |
| Other hits (2 of 56) [Show all] | Species | Id(%) | Len(aa) |
|
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ETFB gene product |
B. taurus |
95.3 |
254 |
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PREDICTED: electron transfer flavoprotein subunit beta |
O. aries |
95.3 |
254 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
heart; spleen; mixed; embryonic tissue; eye; dorsal root ganglion; muscle; adipose tissue; ovary; kidney; placenta; liver; connective tissue; colon; lung; small intestine; uncharacterized tissue; brain; prostate; pancreas; inner ear |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (2)
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BC079351.1 |
Rattus norvegicus electron-transfer-flavoprotein, beta polypeptide, mRNA (cDNA clone MGC:94808 IMAGE:7108112), complete cds |
PA |
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NM_001004220.1 |
Rattus norvegicus electron-transfer-flavoprotein, beta polypeptide (Etfb), mRNA |
PA |
EST sequences (10 of 53) [Show all sequences]
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AA799810.1 |
Clone RHEAF62 |
heart |
3' read |
PA |
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AA849700.1 |
Clone RMUAH82 |
muscle |
3' read |
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AA901289.1 |
Clone UI-R-A1-dp-a-12-0-UI |
mixed |
3' read |
A |
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AI011168.1 |
Clone ROVAQ37 |
ovary |
3' read |
PA |
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AI112956.1 |
Clone UI-R-A1-et-e-11-0-UI |
mixed |
3' read |
PA |
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AI179147.1 |
Clone RSPCC47 |
spleen |
3' read |
PA |
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AI603503.1 |
Clone UI-R-AF0-xz-b-12-0-UI |
embryonic tissue |
3' read |
PA |
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AI703545.1 |
Clone UI-R-AC0-yk-e-03-0-UI |
embryonic tissue |
3' read |
PA |
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AI705387.1 |
Clone UI-R-AC1-xs-b-08-0-UI |
embryonic tissue |
3' read |
PA |
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AI709832.1 |
Clone UI-R-AE1-zb-c-02-0-UI |
heart |
3' read |
PA |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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