ATP citrate lyase (Acly)

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Finding cDNAs

UGID:394230 UniGene Rn.29771 Rattus norvegicus (Norway rat) Acly

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ATP citrate lyase (Acly)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_058683.2	ATP citrate lyase isoform 1	R. norvegicus	100.0	1100
NP_598798.1	ATP citrate lyase	M. musculus	99.9	1090
NP_001087.2	ATP citrate lyase isoform 1	H. sapiens	99.1	1100
NP_001088255.1	hypothetical protein LOC495086	X. laevis	94.2	1090
NP_001002649.1	ATP citrate lyase	D. rerio	92.2	1091
NP_001137674.1	ATP citrate lyase, isoform C	D. melanogaster	78.7	1099
XP_327071.1	hypothetical protein	N. crassa	73.1	643
NP_506267.1	hypothetical protein B0365.1	C. elegans	72.9	1096
NP_187317.1	ACLB-1; ATP citrate synthase	A. thaliana	60.7	601
XP_001701955.1	ATP citrate lyase, subunit B	C. reinhardtii	56.2	528

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	pancreas; uncharacterized tissue; ovary; embryonic tissue; liver; thymus; pituitary gland; mixed; prostate; brain; connective tissue; adipose tissue; vibrissa; dorsal root ganglion; kidney; colon; placenta; adrenal gland; lung; eye; pineal gland; inner ear; spleen

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	10
Map position:	10q32.1
UniSTS entry:		D10Wox19
UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

J05210.1	Rat ATP citrate-lyase mRNA, complete cds	PA
NM_016987.2	Rattus norvegicus ATP citrate lyase (Acly), transcript variant 1, mRNA	PA
BC100618.1	Rattus norvegicus ATP citrate lyase, mRNA (cDNA clone MGC:124629 IMAGE:7934668), complete cds	PA
NM_001111095.1	Rattus norvegicus ATP citrate lyase (Acly), transcript variant 2, mRNA	PA

EST sequences (10 of 165) [Show all sequences]

AA859689.1	Clone UI-R-E0-bx-e-10-0-UI	embryonic tissue	3' read	A
H31258.1	Clone RPCAG12	adrenal gland	5' read	P
H31621.1	Clone RPCAT74	adrenal gland	5' read	P
H34774.1	Clone RPNCR57	adrenal gland	5' read	P
AA899603.1	Clone UI-R-E0-cy-f-10-0-UI	embryonic tissue	3' read	A
AA899604.1	Clone UI-R-E0-cy-f-11-0-UI	embryonic tissue	3' read	A
AA900486.1	Clone UI-R-E0-bw-d-11-0-UI	embryonic tissue	3' read	A
AA997328.1	Clone UI-R-C0-ho-f-05-0-UI	mixed	3' read	PA
AI007876.1	Clone RBRAX26	brain	3' read
AI102826.1	Clone REMBT38	embryonic tissue	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria