Casein kinase 1, alpha 1 (Csnk1a1)

Restricted Expression:

fetus [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

mixed; colon; heart; embryonic tissue; brain; connective tissue; eye; pituitary gland; prostate; adipose tissue; lung; uncharacterized tissue; kidney; thymus; ovary; placenta; inner ear; liver; spleen; pancreas; adrenal gland; muscle

NCBI

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Finding cDNAs

UGID:391171 UniGene Rn.23810 Rattus norvegicus (Norway rat) Csnk1a1

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Casein kinase 1, alpha 1 (Csnk1a1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_002194893.1	PREDICTED: casein kinase 1, alpha 1	T. guttata	100.0	336
XP_001337260.1	PREDICTED: similar to casein kinase I alpha LS	D. rerio	100.0	336
NP_001079933.1	protein kinase CK1 (casein kinase 1) isoform alpha	X. laevis	100.0	336
XP_001106969.1	PREDICTED: casein kinase 1, alpha 1 isoform 9	M. mulatta	100.0	336
XP_001163815.1	PREDICTED: casein kinase 1, alpha 1 isoform 3	P. troglodytes	100.0	336
NP_001883.4	casein kinase 1, alpha 1 isoform 2	H. sapiens	100.0	336
XP_536470.2	PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha) (CK1) isoform 1	C. lupus familiaris	100.0	336
XP_001917775.1	PREDICTED: casein kinase 1, alpha 1 isoform 1	E. caballus	100.0	336
NP_666199.1	casein kinase 1, alpha 1	M. musculus	100.0	324
NP_446067.1	casein kinase 1, alpha 1	R. norvegicus	100.0	324
NP_001001221.1	casein kinase 1, alpha 1	X. tropicalis	100.0	324
NP_777136.1	casein kinase 1, alpha 1	B. taurus	100.0	324
NP_001075842.1	casein kinase 1 alpha	O. cuniculus	100.0	324
NP_990384.1	casein kinase 1, alpha 1	G. gallus	99.7	364
XP_001369214.1	PREDICTED: similar to Casein kinase 1, alpha 1	M. domestica	99.7	336
XP_001508016.1	PREDICTED: similar to casein kinase I alpha LS	O. anatinus	99.7	286
NP_497818.1	protein KINase family member (kin-19)	C. elegans	93.0	314
NP_511140.1	casein kinase ialpha, isoform B	D. melanogaster	85.0	326
XP_001693999.1	ser/thr kinase	C. reinhardtii	78.6	323
XP_324865.1	CASEIN KINASE I HOMOLOG HHP1	N. crassa	75.9	320
NP_001078465.1	ckl4 (Casein Kinase I-like 4); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase	A. thaliana	73.4	304
NP_015120.1	Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, and chromosome segregation; binds the CTD of RNA pol II; homolog of mammalian casein kinase 1delta (CK1delta); Hrr25p	S. cerevisiae	71.1	294

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	18
Map position:	18q12.1
UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

U77582.1	Rattus norvegicus casein kinase 1 alpha (CKIa) mRNA, complete cds	P
NM_053615.1	Rattus norvegicus casein kinase 1, alpha 1 (Csnk1a1), mRNA	P
BC127486.1	Rattus norvegicus casein kinase 1, alpha 1, mRNA (cDNA clone MGC:156603 IMAGE:8364080), complete cds	PA

EST sequences (10 of 111) [Show all sequences]

H33022.1	Clone RPNAD54	adrenal gland	5' read
H33021.1		adrenal gland	3' read	A
AA955819.1	Clone UI-R-E1-fd-f-02-0-UI		3' read	A
AA956341.1	Clone UI-R-E1-fj-c-04-0-UI		3' read
AA964654.1	Clone UI-R-C0-ha-c-07-0-UI	mixed	3' read	P
AA997556.1	Clone UI-R-C0-hw-c-04-0-UI	mixed	3' read
AI030720.1	Clone UI-R-C0-jd-a-01-0-UI	mixed	3' read	P
AI030738.1	Clone UI-R-C0-jd-d-04-0-UI	mixed	3' read	A
AI070257.1	Clone UI-R-Y0-ls-e-08-0-UI	eye	3' read
AI144776.1	Clone UI-R-BT0-pr-d-06-0-UI	mixed	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria