Dehydrogenase E1 and transketolase domain containing 1 (Dhtkd1)

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Finding cDNAs

UGID:384415 UniGene Rn.13539 Rattus norvegicus (Norway rat) Dhtkd1

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Dehydrogenase E1 and transketolase domain containing 1 (Dhtkd1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001020891.1	dehydrogenase E1 and transketolase domain containing 1 precursor	R. norvegicus	100.0	919
NP_001074600.1	dehydrogenase E1 and transketolase domain containing 1 precursor	M. musculus	96.0	918
NP_061176.3	dehydrogenase E1 and transketolase domain containing 1 precursor	H. sapiens	90.0	918
NP_001084395.1	dehydrogenase E1 and transketolase domain containing 1 precursor	X. laevis	81.7	915
NP_001008619.1	dehydrogenase E1 and transketolase domain containing 1	D. rerio	77.0	896
NP_506060.2	hypothetical protein ZK836.2	C. elegans	54.1	906
NP_651849.1	CG1544, isoform A	D. melanogaster	52.3	897
XP_001692870.1	2-oxoglutarate dehydrogenase, E1 subunit	C. reinhardtii	47.4	851

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	liver; kidney; lung; colon; uncharacterized tissue; prostate; heart; brain; mixed; placenta; eye

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	17
Map position:	17q12.3
UniSTS entry:		RH130992
UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC099075.1	Rattus norvegicus dehydrogenase E1 and transketolase domain containing 1, mRNA (cDNA clone MGC:116097 IMAGE:7441857), complete cds	PA
	NM_001025720.1	Rattus norvegicus dehydrogenase E1 and transketolase domain containing 1 (Dhtkd1), mRNA	PA

EST sequences (10 of 42) [Show all sequences]

AA800340.1	Clone RLIAA09	liver	3' read
AA800341.1	Clone RLIAA09	liver	5' read
AI007617.1	Clone RBRAS29	brain	3' read
AI045511.1	Clone UI-R-C1-kj-g-11-0-UI	mixed	3' read	A
AI169947.1	Clone RLIAX46	liver	3' read
AW143247.1	Clone RGIBG50	brain	5' read
AI406456.1	Clone RBRDN19	brain	3' read	A
AI409946.1	Clone RPLDN19	placenta	3' read	A
BF560746.1	Clone UI-R-C1-kj-g-11-0-UI	mixed	5' read
BG379958.1	Clone UI-R-CS0-bto-c-06-0-UI	heart	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria