TRNA aspartic acid methyltransferase 1 (Trdmt1)

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Finding cDNAs

UGID:377237 UniGene Rn.115 Rattus norvegicus (Norway rat) Trdmt1

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TRNA aspartic acid methyltransferase 1 (Trdmt1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001026813.1	tRNA aspartic acid methyltransferase 1	R. norvegicus	100.0	390
NP_034197.3	tRNA aspartic acid methyltransferase 1	M. musculus	92.8	391
NP_004403.1	tRNA aspartic acid methyltransferase 1 isoform a	H. sapiens	82.3	390
NP_001079673.1	similar to DNA (cytosine-5-)-methyltransferase 2	X. laevis	70.0	380
NP_001018153.1	DNA methyltransferase 2	D. rerio	64.2	377

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; muscle; uncharacterized tissue; lung; thymus; mixed; connective tissue; inner ear

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	17
Map position:	17q12.3
UniSTS entry:		RH128044

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC098700.1	Rattus norvegicus tRNA aspartic acid methyltransferase 1, mRNA (cDNA clone MGC:112666 IMAGE:7387075), complete cds	PA
	NM_001031643.1	Rattus norvegicus tRNA aspartic acid methyltransferase 1 (Trdmt1), mRNA	PA

EST sequences (10 of 18) [Show all sequences]

AA858638.1	Clone UI-R-E0-bq-d-06-0-UI	embryonic tissue	3' read	A
AA923969.1	Clone UI-R-A1-dq-e-05-0-UI	mixed	3' read	A
AI170819.1	Clone RMUBB86	muscle	3' read	PA
BF547963.1	Clone UI-R-E0-bq-d-06-0-UI	embryonic tissue	5' read	A
CB547923.1	Clone nrhy5-00457-e10	brain	5' read
CB711200.1	Clone urrg1-00036-c7	uncharacterized tissue	5' read	A
CB740372.1	Clone urrg1-00168-f9	uncharacterized tissue	5' read
CF112556.1	Clone CA6352	lung	5' read	P
CO401807.1	Clone IMAGE:7314223	brain	5' read
CV073125.1	Clone IMAGE:7388528	thymus	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria