Os05g0540000 (Os05g0540000)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:362742 UniGene Os.8729 Oryza sativa (rice) Os05g0540000

Links

Os05g0540000 (Os05g0540000)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001056178.1	Os05g0540000	O. sativa	100.0	743
NP_196070.2	glycosyltransferase family protein 47	A. thaliana	61.4	713

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	leaf; mixed; flower; callus; panicle; root; stem; unspecified tissue; whole plant; sheath

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK100416.1	Oryza sativa Japonica Group cDNA clone:J023087M19, full insert sequence	P
	NM_001062713.1	Oryza sativa (japonica cultivar-group) Os05g0540000 (Os05g0540000) mRNA, complete cds	P

EST sequences (10 of 66) [Show all sequences]

AU092097.1	Clone C10490	callus		PA
D21926.1	Clone C10059_1A	callus
D22205.1	Clone C10490_3A	callus
D22260.1	Clone C10622_1A	callus
CB627752.1	Clone OSIIEb02O10	leaf	5' read	P
CB627753.1	Clone OSIIEb02O10	leaf	3' read
CB630181.1	Clone OSIIEb06P19	leaf	5' read	P
CB630182.1	Clone OSIIEb06P19	leaf	3' read	P
CB632878.1	Clone OSIIEb11G13	leaf	5' read	P
CB632879.1	Clone OSIIEb11G13	leaf	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria