Os07g0195400 (Os07g0195400)

NCBI

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Finding cDNAs

UGID:360205 UniGene Os.5949 Oryza sativa (rice) Os07g0195400

Links

Os07g0195400 (Os07g0195400)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001059117.1	Os07g0195400	O. sativa	100.0	561
NP_568359.2	DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101); intramolecular transferase, phosphotransferases / magnesium ion binding	A. thaliana	58.7	550
NP_001080884.1	phosphoglucomutase 3	X. laevis	50.6	518
NP_001007054.1	phosphoglucomutase 3	D. rerio	50.5	521
XP_001694350.1	predicted protein	C. reinhardtii	50.0	530
NP_056414.1	phosphoglucomutase 3	H. sapiens	49.3	517
NP_648588.1	CG10627	D. melanogaster	48.8	518
NP_082628.3	phosphoglucomutase 3 isoform 1	M. musculus	48.5	517
XP_963909.2	hypothetical protein NCU07458	N. crassa	45.6	540
NP_010856.1	Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precursor for the biosynthesis of chitin and for the formation of N-glycosylated mannoproteins and glycosylphosphatidylinositol anchors; Pcm1p	S. cerevisiae	45.0	533

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	leaf; whole plant; flower; other; callus; panicle; root

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK069901.1	Oryza sativa Japonica Group cDNA clone:J023034C14, full insert sequence	P
	NM_001065652.1	Oryza sativa (japonica cultivar-group) Os07g0195400 (Os07g0195400) mRNA, complete cds	P

EST sequences (10 of 17) [Show all sequences]

AU173327.1	Clone R2187	root		PA
BQ908324.1	Clone T006D02	leaf		PA
BQ909020.1	Clone T018H10	leaf		PA
CB619771.1	Clone OSIIEa04I14	leaf	5' read	P
CB619772.1	Clone OSIIEa04I14	leaf	3' read	P
CB619773.1	Clone OSIIEa04I15	leaf	5' read
CB619774.1	Clone OSIIEa04I15	leaf	3' read	P
CB627845.1	Clone OSIIEb03A17	leaf	5' read	P
CK067279.1		panicle	5' read	P
CX104225.1	Clone BI076L05	whole plant	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria