Os05g0533500 (Os05g0533500)

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Finding cDNAs

UGID:1206169 UniGene Os.48286 Oryza sativa (rice) Os05g0533500

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Os05g0533500 (Os05g0533500)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001056141.1	Os05g0533500	O. sativa	100.0	313
NP_200487.1	ATSERAT1;1 (ARABIDOPSIS THALIANA SERINE ACETYLTRANSFERASE 1;1); serine O-acetyltransferase	A. thaliana	79.4	280
XP_001698456.1	serine acetyltransferase	C. reinhardtii	55.4	259

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; other; leaf; unspecified tissue; panicle

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_001062676.1	Oryza sativa (japonica cultivar-group) Os05g0533500 (Os05g0533500) mRNA, complete cds	P
AK241333.1	Oryza sativa Japonica Group cDNA, clone: J065144I22, full insert sequence	P
CT836377.1	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI005D13, full insert sequence
AK287779.1	Oryza sativa Japonica Group cDNA, clone: J065171F21, full insert sequence	P

EST sequences (11)

CR280415.1	Clone p761h03p3	unspecified tissue		PA
CK067241.1		panicle	5' read	PA
CI283138.1	Clone 083-M153R-D10	mixed	3' read	PA
CI283144.1	Clone 083-M153R-E07	mixed	3' read	PA
CI201737.1	Clone 037-M041R-G03	mixed	3' read	PA
CI215001.1	Clone 039-M014R-F08	mixed	3' read	PA
CI394537.1	Clone J04B3020G12M3	other	3' read
CI413660.1	Clone J06B5057K15M3	leaf	3' read	A
CI432428.1	Clone J06B5144I22M3	leaf	3' read
CI437871.1	Clone J06B5171F21M3	leaf	3' read
CT853021.1	Clone OSIGCRN109O16	unspecified tissue		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria