Os04g0477500 (Os04g0477500)

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Finding cDNAs

UGID:366055 UniGene Os.12301 Oryza sativa (rice) Os04g0477500

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Os04g0477500 (Os04g0477500)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001053087.1	Os04g0477500	O. sativa	100.0	387
NP_196952.1	glycosyl transferase family 17 protein	A. thaliana	76.0	383

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	panicle; leaf; mixed; stem; callus; unspecified tissue; other; flower; whole plant

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK100897.1	Oryza sativa Japonica Group cDNA clone:J023131C16, full insert sequence	P
AK067372.1	Oryza sativa Japonica Group cDNA clone:J013106K01, full insert sequence	P
AK063950.1	Oryza sativa Japonica Group cDNA clone:001-123-F04, full insert sequence	P
NM_001059622.1	Oryza sativa (japonica cultivar-group) Os04g0477500 (Os04g0477500) mRNA, complete cds	P
CT829778.1	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI245J02, full insert sequence	P

EST sequences (10 of 67) [Show all sequences]

AU164335.1	Clone E40154	panicle		PA
AU101115.1	Clone E0896	panicle		PA
AU096284.1	Clone S13322	stem		A
AU063834.1	Clone E0896_1A	panicle		P
AU064631.1	Clone E40154_1A	panicle		P
AU064664.1	Clone E40208_1A	panicle		P
D47684.1		stem		P
CA753034.1	Clone 00200013003.C01_00120110JD.scf	leaf		P
CA762197.1	Clone BR060014B20A02.ab1	panicle		PA
CA767363.2	Clone C0002572	panicle	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria