> Colony stimulating factor 1 (macrophage) (Csf1)
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UGID:256039     UniGene Mm.795     Mus musculus (mouse)   Csf1 Order cDNA clone, Links
Colony stimulating factor 1 (macrophage) (Csf1)

Mouse protein-coding gene Csf1. Represented by 183 ESTs from 79 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 256039 - Mm.795]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_031804.3 Csf1 gene product M. musculus 100.0 551
NP_000748.3 macrophage colony-stimulating factor 1 isoform a precursor H. sapiens 77.3 553
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
NP_076471.3 Csf1 gene product R. norvegicus 85.7 565
XP_004003647.1 PREDICTED: macrophage colony-stimulating factor 1 O. aries 80.8 329

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mammary gland; embryonic tissue; connective tissue; extraembryonic tissue; muscle; uncharacterized tissue; mixed; bone; brain; ovary; testis; pancreas; spleen; bone marrow; eye; lymph node; heart; intestine; thymus; fertilized ovum; uterus; lung; skin; blood; spinal cord; adipose tissue; salivary gland; kidney; inner ear; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3 F3|3 46.83 cM
UniSTS entry: Chr 3 PMC137879P1
UniSTS entry: Chr 3 RH127296
UniSTS entry: Chr 3 AI547928
UniSTS entry: Chr 3 PMC150930P2
UniSTS entry: Chr 3 M21952
UniSTS entry: Chr 3 PMC101742P1
UniSTS entry: Chr 3 X05010
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

M15692.1 Mouse macrophage colony-stimulating factor mRNA, 5' end P
BC066187.1 Mus musculus colony stimulating factor 1 (macrophage), mRNA (cDNA clone MGC:76646 IMAGE:30106218), complete cds PA
BC066205.1 Mus musculus colony stimulating factor 1 (macrophage), mRNA (cDNA clone MGC:76729 IMAGE:30100601), complete cds PA
BC066200.1 Mus musculus colony stimulating factor 1 (macrophage), mRNA (cDNA clone MGC:76700 IMAGE:30100524), complete cds PA
AK138489.1 Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330040A13 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK170154.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630022M14 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK136808.1 Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330020O11 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK154872.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110F02 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK154261.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630013B20 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK166370.1 Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930003A20 product:colony stimulating factor 1 (macrophage), full insert sequence P
AK160995.1 Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022433J21 product:colony stimulating factor 1 (macrophage), full insert sequence P
NM_001113530.1 Mus musculus colony stimulating factor 1 (macrophage) (Csf1), transcript variant 3, mRNA PA
NM_001113529.1 Mus musculus colony stimulating factor 1 (macrophage) (Csf1), transcript variant 2, mRNA PA
X05010.1 Mouse mRNA for colony stimulating factor-1 CSF-1 (M-CSF) P
M21952.1 Mouse macrophage colony-stimulating factor (4 kb) mRNA, complete cds P
M21149.1 Mouse macrophage colony-stimulating factor (2 kb) mRNA, complete cds P
NM_007778.4 Mus musculus colony stimulating factor 1 (macrophage) (Csf1), transcript variant 1, mRNA PA
BC025593.1 Mus musculus colony stimulating factor 1 (macrophage), mRNA (cDNA clone IMAGE:5342906), complete cds PA

EST sequences (10 of 183) [Show all sequences]

CA564062.1 Clone NIA:K0321E01_IMAGE:30056304 bone 5' read P
CA564938.1 Clone NIA:K0331H09_IMAGE:30057308 bone 5' read P
CA565098.1 Clone NIA:K0333G10_IMAGE:30057489 bone 5' read P
CA565615.1 Clone NIA:K0340C08_IMAGE:30058111 bone 5' read P
CA566540.1 Clone NIA:K0402E10_IMAGE:30059289 bone marrow 5' read P
CA567420.1 Clone NIA:K0414A05_IMAGE:30060388 bone marrow 5' read
CA567545.1 Clone NIA:K0415G01_IMAGE:30060552 bone marrow 5' read P
BY028006.1 Clone G930046N10 mammary gland 5' read P
BY028137.1 Clone G930047G09 mammary gland 5' read P
BY175572.1 Clone F630013B20 uncharacterized tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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