Chemokine-like receptor 1 (Cmklr1)

Restricted Expression:

joint [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

joint; mammary gland; pancreas; uncharacterized tissue; lung; fertilized ovum; ovary; testis; inner ear; mixed; spleen; skin

NCBI

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Finding cDNAs

UGID:258096 UniGene Mm.5196 Mus musculus (mouse) Cmklr1

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Chemokine-like receptor 1 (Cmklr1)

Mouse protein-coding gene Cmklr1. Represented by 37 ESTs from 17 cDNA libraries. EST representation biased toward joint. Corresponds to reference sequence NM_008153.3. [UniGene 258096 - Mm.5196]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_032179.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cmklr1 gene product	M. musculus	100.0	370
NP_004063.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	chemokine-like receptor 1 isoform b	H. sapiens	81.9	370
Other hits (2 of 19) [Show all]		Species	Id(%)	Len(aa)
NP_071554.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cmklr1 gene product	R. norvegicus	91.4	371
XP_002722169.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: chemokine-like receptor 1	O. cuniculus	83.1	371

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	5
Map position:	5 F\|5
UniSTS entry:	Chr 5	U79525

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_008153.3	Mus musculus chemokine-like receptor 1 (Cmklr1), mRNA	P
BC100612.1	Mus musculus chemokine-like receptor 1, mRNA (cDNA clone MGC:106100 IMAGE:2654794), complete cds	PA
AK158424.1	Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930115P06 product:chemokine-like receptor 1, full insert sequence	P
U79525.1	Mus musculus orphan G-protein coupled receptor Dez mRNA, complete cds	P

EST sequences (10 of 37) [Show all sequences]

BY343981.1	Clone L730001G06	joint	5' read
BY344202.1	Clone L730003G11	joint	5' read
BY347978.1	Clone L830004N13	joint	5' read
BY348026.1	Clone L830005A22	joint	5' read
BY349520.1	Clone L830012K18	joint	5' read
BY350745.1	Clone L830019H12	joint	5' read
BY351230.1	Clone L830021P12	joint	5' read
BY351512.1	Clone L830023I07	joint	5' read
BY351617.1	Clone L830024C19	joint	5' read
BY351921.1	Clone L830025N10	joint	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria