Gastric intrinsic factor (Gif)

Restricted Expression:

stomach [show more like this]

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

stomach; intestine; mixed

NCBI

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Finding cDNAs

UGID:255917 UniGene Mm.456 Mus musculus (mouse) Gif

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Gastric intrinsic factor (Gif)

Mouse protein-coding gene Gif. Represented by 18 ESTs from 6 cDNA libraries. EST representation biased toward stomach; adult. Corresponds to reference sequence NM_008118.3. [UniGene 255917 - Mm.456]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_032144.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Gif gene product	M. musculus	100.0	416
NP_005133.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	GIF gene product	H. sapiens	83.2	416
Other hits (2 of 12) [Show all]		Species	Id(%)	Len(aa)
NP_058858.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	gastric intrinsic factor precursor	R. norvegicus	91.2	419
XP_508453.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: gastric intrinsic factor isoform 2	P. troglodytes	83.5	416

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	19
Map position:	19 A\|19
UniSTS entry:	Chr 19	L24191
UniSTS entry:	Chr 19	AV073125
UniSTS entry:	Chr 19	Gif
UniSTS entry:		Gif

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK078933.1	Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130204L19 product:gastric intrinsic factor, full insert sequence	P
BC118519.1	Mus musculus gastric intrinsic factor, mRNA (cDNA clone MGC:144768 IMAGE:40105765), complete cds	P
L24191.1	Mus musculus intrinsic factor mRNA, complete cds	P
NM_008118.3	Mus musculus gastric intrinsic factor (Gif), mRNA	P

EST sequences (10 of 18) [Show all sequences]

BY092114.1	Clone K630090C21	stomach	5' read	P
BY099577.1	Clone K630128E07	mixed	5' read	P
BY355709.1	Clone 2210417J01	stomach	3' read	P
BY456365.1	Clone K630090C21	stomach	3' read	PA
CK373942.1		stomach	5' read	P
AV072137.1	Clone 2200002I09	stomach
AV073125.1	Clone 2200008M01	stomach
AV073132.1	Clone 2200008M24	stomach
AV075644.1	Clone 2210014M07	stomach
AV079258.1	Clone 2210408J09	stomach

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria