> Cytochrome c oxidase, subunit VIb polypeptide 1 (Cox6b1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:255897     UniGene Mm.400     Mus musculus (mouse)   Cox6b1 Order cDNA clone, Links
Cytochrome c oxidase, subunit VIb polypeptide 1 (Cox6b1)

Mouse protein-coding gene Cox6b1. Represented by 1074 ESTs from 158 cDNA libraries. Corresponds to reference sequence NM_025628.2. [UniGene 255897 - Mm.400]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079904.1 cytochrome c oxidase subunit 6B1 M. musculus 100.0 85
NP_001854.1 cytochrome c oxidase subunit 6B1 H. sapiens 90.7 85
NP_001002695.1 cox6b1 gene product D. rerio 74.4 85
NP_001165173.1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) X. laevis 73.3 85
NP_728295.1 cytochrome c oxidase subunit VIb, isoform B D. melanogaster 56.2 72
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_002722267.1 PREDICTED: cytochrome c oxidase subunit VIb polypeptide 1-like O. cuniculus 97.7 85
XP_003432644.1 PREDICTED: cytochrome c oxidase subunit 6B1-like isoform 1 C. lupus familiaris 96.5 85

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; embryonic tissue; stomach; brain; kidney; heart; mammary gland; mixed; prostate; eye; tongue; pancreas; liver; thymus; extraembryonic tissue; thyroid; testis; bone marrow; spleen; uterus; muscle; skin; molar; blood; ovary; uncharacterized tissue; joint; lung; spinal cord; dorsal root ganglion; pituitary gland; salivary gland; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7 B1|7 18.84 cM
UniSTS entry: Cox6b1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK011089.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510042D06 product:CYTOCHROME C OXIDASE POLYPEPTIDE VIB (EC 1.9.3.1) (AED) homolog [Mus musculus], full insert sequence PA
AK018721.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007M20 product:CYTOCHROME C OXIDASE POLYPEPTIDE VIB (EC 1.9.3.1) (AED) homolog [Mus musculus], full insert sequence P
AK012686.1 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810008A21 product:CYTOCHROME C OXIDASE POLYPEPTIDE VIB (EC 1.9.3.1) (AED) homolog [Mus musculus], full insert sequence P
AK007996.1 Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010000G05 product:CYTOCHROME C OXIDASE POLYPEPTIDE VIB (EC 1.9.3.1) (AED) homolog [Bos taurus], full insert sequence P
NM_025628.2 Mus musculus cytochrome c oxidase, subunit VIb polypeptide 1 (Cox6b1), nuclear gene encoding mitochondrial protein, mRNA P
BC024343.1 Mus musculus cytochrome c oxidase, subunit VIb polypeptide 1, mRNA (cDNA clone MGC:35725 IMAGE:4989436), complete cds PA

EST sequences (10 of 1074) [Show all sequences]

CA786727.1 Clone IMAGE:6757287 heart 5' read P
CA786732.1 Clone IMAGE:6757300 heart 5' read P
CA787111.1 Clone IMAGE:6757988 heart 5' read PA
CA787205.1 Clone IMAGE:6758571 heart 5' read P
BY005492.1 Clone F430003N09 spleen 5' read
BY027930.1 Clone G930046G12 mammary gland 5' read
BY033900.1 Clone I530008B13 extraembryonic tissue 5' read P
BY035596.1 Clone I530019P17 extraembryonic tissue 5' read P
BY041645.1 Clone I730020A18 thymus 5' read P
BY042176.1 Clone I730023A12 thymus 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help