Transcribed locus, strongly similar to NP_001239145.1 protein FAM19A1 precursor [Homo sapiens]

Restricted Expression:

brain [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

brain; mixed; embryonic tissue

NCBI

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Finding cDNAs

UGID:1132314 UniGene Mm.333278 Mus musculus (mouse)

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Transcribed locus, strongly similar to NP_001239145.1 protein FAM19A1 precursor [Homo sapiens]

Mouse putative protein-coding gene. Represented by 16 ESTs from 6 cDNA libraries. EST representation biased toward brain. [UniGene 1132314 - Mm.333278]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_877960.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	protein FAM19A1 precursor	M. musculus	100.0	104
NP_001239145.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	protein FAM19A1 precursor	H. sapiens	98.1	104
XP_003201230.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein FAM19A1-like	D. rerio	72.1	104
Other hits (2 of 20) [Show all]		Species	Id(%)	Len(aa)
XP_001510389.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein FAM19A1-like	O. anatinus	98.5	65
XP_003132359.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein FAM19A1-like	S. scrofa	98.5	65

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (10 of 16) [Show all sequences]

BY250323.1	Clone K230331H06	brain	5' read
BY256413.1	Clone K330024F05	brain	5' read
BY283473.1	Clone K530010M21	brain	5' read
BY283942.1	Clone K530014M22	brain	5' read
BY297231.1	Clone K530350M19	brain	5' read
BY622497.1	Clone K330316D16	brain	3' read
CN457988.1	Clone IMAGE:30651426	embryonic tissue	5' read
CO039553.1	Clone UI-M-BH1-and-c-09-0-UI	mixed	3' read	A
CJ150535.1	Clone K330316D16	brain	5' read
CJ285751.1	Clone K330024F05	brain	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria