> Catenin (cadherin associated protein), beta 1 (Ctnnb1)
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UGID:1074427     UniGene Mm.291928     Mus musculus (mouse)   Ctnnb1 Order cDNA clone, Links
Catenin (cadherin associated protein), beta 1 (Ctnnb1)

Mouse protein-coding gene Ctnnb1. Represented by 2056 ESTs from 359 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1074427 - Mm.291928]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003207299.1 PREDICTED: catenin beta-1-like M. gallopavo 100.0 788
NP_001159374.1 Ctnnb1 gene product M. musculus 100.0 780
NP_445809.2 Ctnnb1 gene product R. norvegicus 100.0 780
XP_001369277.1 PREDICTED: catenin beta-1-like M. domestica 100.0 780
XP_003224002.1 PREDICTED: catenin beta-1-like A. carolinensis 100.0 780
XP_002199072.1 PREDICTED: catenin beta-1 T. guttata 100.0 780
NP_990412.1 CTNNB1 gene product G. gallus 100.0 780
XP_002802884.1 PREDICTED: catenin beta-1 isoform 2 M. mulatta 100.0 780
XP_003894668.1 PREDICTED: catenin beta-1 isoform 1 P. anubis 100.0 780
XP_001138023.1 PREDICTED: catenin beta-1 isoform 10 P. troglodytes 100.0 780
NP_001091680.1 CTNNB1 gene product H. sapiens 100.0 780
NP_001131124.1 CTNNB1 gene product C. lupus familiaris 100.0 780
NP_001116234.1 CTNNB1 gene product E. caballus 100.0 780
NP_999532.1 CTNNB1 gene product S. scrofa 100.0 780
NP_001069609.1 CTNNB1 gene product B. taurus 100.0 780
XP_004018292.1 PREDICTED: catenin beta-1 isoform 1 O. aries 100.0 780
XP_002713121.1 PREDICTED: beta-catenin O. cuniculus 100.0 780
NP_001016958.1 ctnnb1 gene product X. tropicalis 99.7 780
NP_001084045.1 catenin beta X. laevis 99.6 780
NP_001167409.1 Catenin beta-1 S. salar 99.6 779
NP_571134.2 ctnnb1 gene product D. rerio 99.2 779
NP_476666.1 armadillo, isoform A D. melanogaster 82.3 819
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_003965981.1 PREDICTED: catenin beta-1-like T. rubripes 99.4 780
XP_004077826.1 PREDICTED: catenin beta-1-like O. latipes 99.2 782

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; eye; bone marrow; mixed; ovary; lung; pancreas; thymus; skin; uncharacterized tissue; testis; extraembryonic tissue; bone; kidney; liver; sympathetic ganglion; prostate; intestine; blood; spinal cord; spleen; fertilized ovum; inner ear; pituitary gland; heart; dorsal root ganglion; vagina; bladder; muscle; adrenal gland; molar; connective tissue; pineal gland; oviduct; nasopharynx; epididymis; stomach; thyroid; tongue; lymph node; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 F4|9 72.19 cM
UniSTS entry: Chr 9 Ctnnb1
UniSTS entry: Chr 9 Ctnnb1
UniSTS entry: Chr 9 Ctnnb1
UniSTS entry: Chr 9 Catnb
UniSTS entry: RH140639
UniSTS entry: Chr 9 PMC316619P1
UniSTS entry: Ctnnb1
UniSTS entry: Ndufb11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (43)

AK035311.1 Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530013P13 product:catenin beta, full insert sequence P
BC043078.1 Mus musculus catenin (cadherin associated protein), beta 1, mRNA (cDNA clone IMAGE:5721147) PA
BC043481.1 Mus musculus catenin (cadherin associated protein), beta 1, mRNA (cDNA clone IMAGE:5148300), partial cds PA
BC048153.1 Mus musculus catenin (cadherin associated protein), beta 1, mRNA (cDNA clone MGC:61364 IMAGE:5709247), complete cds PA
BC053065.1 Mus musculus catenin (cadherin associated protein), beta 1, mRNA (cDNA clone MGC:62386 IMAGE:5709247), complete cds PA
AK219949.1 Mus musculus cDNA, clone:Y2G0150D21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK219273.1 Mus musculus cDNA, clone:Y2G0147P07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK214825.1 Mus musculus cDNA, clone:Y2G0133C06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK211747.1 Mus musculus cDNA, clone:Y2G0122L19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK210672.1 Mus musculus cDNA, clone:Y2G0119D11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK209437.1 Mus musculus cDNA, clone:Y2G0115C03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK209047.1 Mus musculus cDNA, clone:Y2G0113L21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK208830.1 Mus musculus cDNA, clone:Y2G0112O08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK205694.1 Mus musculus cDNA, clone:Y2G0102H21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK204053.1 Mus musculus cDNA, clone:Y1G0147C18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK203824.1 Mus musculus cDNA, clone:Y1G0146F07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK202371.1 Mus musculus cDNA, clone:Y1G0141E15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK201809.1 Mus musculus cDNA, clone:Y1G0139G24, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK201646.1 Mus musculus cDNA, clone:Y1G0138O13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK199952.1 Mus musculus cDNA, clone:Y1G0132N24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK197753.1 Mus musculus cDNA, clone:Y1G0126B01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK197664.1 Mus musculus cDNA, clone:Y1G0125M09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK197513.1 Mus musculus cDNA, clone:Y1G0125F07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK196547.1 Mus musculus cDNA, clone:Y1G0122C19, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK196236.1 Mus musculus cDNA, clone:Y1G0121D15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK191852.1 Mus musculus cDNA, clone:Y1G0107C14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK190684.1 Mus musculus cDNA, clone:Y1G0103H22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK189807.1 Mus musculus cDNA, clone:Y0G0150L14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK187218.1 Mus musculus cDNA, clone:Y0G0140I04, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK184861.1 Mus musculus cDNA, clone:Y0G0131M10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK180997.1 Mus musculus cDNA, clone:Y0G0116J09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK179260.1 Mus musculus cDNA, clone:Y0G0109K18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search
AK179148.1 Mus musculus cDNA, clone:Y0G0109F01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AK178155.1 Mus musculus cDNA, clone:Y0G0105K08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007130, based on BLAT search P
AY751549.1 Mus musculus MES-cadenin-like (Mesc) mRNA, complete sequence P
AK133656.1 Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330431B01 product:catenin beta, full insert sequence P
AK132398.1 Mus musculus 1 day pregnant adult female mammary gland cDNA, RIKEN full-length enriched library, clone:4222404F16 product:catenin beta, full insert sequence P
AK135743.1 Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420409L11 product:catenin beta, full insert sequence P
NM_001165902.1 Mus musculus catenin (cadherin associated protein), beta 1 (Ctnnb1), transcript variant 2, mRNA PA
M90364.1 Mouse (clone pMCAT) beta-catenin mRNA, complete cds P
NM_007614.3 Mus musculus catenin (cadherin associated protein), beta 1 (Ctnnb1), transcript variant 1, mRNA PA
AK020013.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830416C23 product:catenin beta, full insert sequence P
AK018515.1 Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030417H18 product:catenin beta, full insert sequence P

EST sequences (10 of 2056) [Show all sequences]

CA565826.1 Clone NIA:K0342G06_IMAGE:30058349 bone 5' read P
CA568885.1 Clone NIA:K0434G02_IMAGE:30062377 bone marrow 5' read P
CA569530.1 Clone NIA:K0444C10_IMAGE:30063297 bone marrow 5' read P
CA569838.1 Clone NIA:K0447H07_IMAGE:30063642 bone marrow 5' read P
CA570090.1 Clone NIA:K0501D12_IMAGE:30063983 bone marrow 5' read
CA570487.1 Clone NIA:K0507A10_IMAGE:30064521 bone marrow 5' read P
CA571279.1 Clone NIA:K0518B08_IMAGE:30065587 bone marrow 5' read P
CA571996.1 Clone NIA:K0527G04_IMAGE:30066507 bone marrow 5' read P
CA572026.1 Clone NIA:K0528B07_IMAGE:30066546 bone marrow 5' read P
CA573361.1 Clone NIA:K0600A04_IMAGE:30068739 bone marrow 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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