Ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (Ube2d1)

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UGID:632543 UniGene Mm.270530 Mus musculus (mouse) Ube2d1

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Ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (Ube2d1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_663395.1	ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog	M. musculus	100.0	146
XP_342126.3	PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog	R. norvegicus	100.0	146
XP_001363765.1	PREDICTED: similar to Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme Ubch5a	M. domestica	100.0	146
XP_002188503.1	PREDICTED: ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	T. guttata	100.0	146
XP_421525.1	PREDICTED: similar to ubiquitin conjugating enzyme	G. gallus	100.0	146
XP_001097762.1	PREDICTED: ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	M. mulatta	100.0	146
XP_001163868.1	PREDICTED: ubiquitin-conjugating enzyme E2D 1 isoform 2	P. troglodytes	100.0	146
NP_003329.1	ubiquitin-conjugating enzyme E2D 1	H. sapiens	100.0	146
XP_850730.1	PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog	C. lupus familiaris	100.0	146
XP_001503425.1	PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (E2(17)KB 1) (UBC4/5 homolog) (Stimulator of Fe transport) (SFT)	E. caballus	100.0	146
NP_001072142.1	UB2D1	S. scrofa	100.0	146
NP_001033256.1	ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	B. taurus	100.0	146
NP_001086505.1	ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)	X. laevis	96.6	146
NP_955958.1	ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	D. rerio	95.9	146
NP_502065.1	LEThal family member (let-70)	C. elegans	91.8	146
NP_731941.1	effete	D. melanogaster	91.8	146
NP_009638.1	Ubiquitin-conjugating enzyme (E2), mediates degradation of short-lived and abnormal proteins; interacts with E3-CaM in ubiquitinating calmodulin; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; Ubc4p	S. cerevisiae	83.5	144
XP_959933.2	hypothetical protein NCU02289	N. crassa	83.0	146
XP_001699308.1	ubiquitin conjugating enzyme	C. reinhardtii	80.3	147
NP_566331.1	UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase	A. thaliana	78.9	147

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; brain; mammary gland; mixed; spleen; muscle; thymus; eye; spinal cord; lymph node; bone marrow; extraembryonic tissue; tongue; epididymis; bone; intestine; uncharacterized tissue; skin; lung; dorsal root ganglion; heart; kidney; stomach; oviduct; connective tissue; pancreas; testis; prostate

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	10
Map position:	10 B5.3
UniSTS entry:	Chr 10	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK037532.1	Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130024C22 product:ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), full insert sequence
AK043167.1	Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730062O07 product:similar to UBIQUITIN CONJUGATING ENZYME (FRAGMENT) [Sus scrofa], full insert sequence	P
BC054058.1	Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), mRNA (cDNA clone IMAGE:1399863)	A
AK214502.1	Mus musculus cDNA, clone:Y2G0131P16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000020085, based on BLAT search
AK187403.1	Mus musculus cDNA, clone:Y0G0141K16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000020085, based on BLAT search
AK148364.1	Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370114C01 product:ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), full insert sequence	P
AK144468.1	Mus musculus adult male accessory axillary lymph node cDNA, RIKEN full-length enriched library, clone:G630075H02 product:ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), full insert sequence	P
BC019464.1	Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), mRNA (cDNA clone MGC:28550 IMAGE:4205941), complete cds	PA
NM_145420.2	Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (Ube2d1), mRNA	PA

EST sequences (10 of 171) [Show all sequences]

BY008427.1	Clone G630015A08	mixed	5' read	P
BY008793.1	Clone G630031G16	mixed	5' read
BY009065.1	Clone G630045F16	mixed	5' read
BY016318.1	Clone G830016J17	mammary gland	5' read	P
BY021228.1	Clone G830046G20	mammary gland	5' read	P
BY069332.1	Clone I920065P12	kidney	5' read	P
BY098257.1	Clone K630121K01	mixed	5' read	P
BY102083.1	Clone K630141O20	mixed	5' read	P
BY111155.1	Clone L330043B19	embryonic tissue	5' read	P
BY199072.1	Clone F730041G18	skin	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria