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UGID:263259     UniGene Mm.26743     Mus musculus (mouse)   Apoa1
Apolipoprotein A-I (Apoa1)

Mouse protein-coding gene Apoa1. Represented by 1383 ESTs from 71 cDNA libraries. Corresponds to reference sequence NM_009692.3. [UniGene 263259 - Mm.26743]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033822.2 Apoa1 gene product M. musculus 100.0 263
NP_000030.1 APOA1 gene product H. sapiens 73.8 266
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
NP_036870.1 Apoa1 gene product R. norvegicus 81.1 258
XP_536564.2 PREDICTED: apolipoprotein A-I C. lupus familiaris 77.4 265

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; intestine; extraembryonic tissue; embryonic tissue; mixed; muscle; stomach; kidney; lung; heart; uterus; brain; salivary gland; uncharacterized tissue; thymus; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 A2-A4|9 25.36 cM
UniSTS entry: Chr 9 Apoa1
UniSTS entry: Chr 9 RH136618
UniSTS entry: Chr 9 PMC200987P2
UniSTS entry: Chr 9 PMC200987P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK076187.1 Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830418K20 product:apolipoprotein A-I, full insert sequence P
L04151.1 Mouse apolipoprotein A-I/CIII mRNA P
BC091745.1 Mus musculus apolipoprotein A-I, mRNA (cDNA clone MGC:102525 IMAGE:5126143), complete cds PA
AK131864.1 Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010012G12 product:apolipoprotein A-I, full insert sequence P
AK161536.1 Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5033405M02 product:apolipoprotein A-I, full insert sequence P
AK149576.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730042K13 product:apolipoprotein A-I, full insert sequence P
X64262.1 M.musculus mRNA for Apolipoprotein A-I PA
NM_009692.3 Mus musculus apolipoprotein A-I (Apoa1), mRNA PA
BC012253.1 Mus musculus apolipoprotein A-I, mRNA (cDNA clone MGC:18650 IMAGE:4195624), complete cds PA
BC019837.1 Mus musculus apolipoprotein A-I, mRNA (cDNA clone MGC:29972 IMAGE:5123746), complete cds PA

EST sequences (10 of 1383) [Show all sequences]

BY061018.1 Clone I920013O18 extraembryonic tissue 5' read P
BY061958.1 Clone I920020C11 extraembryonic tissue 5' read P
BY063689.1 Clone I920029I23 extraembryonic tissue 5' read P
BY064137.1 Clone I920032N21 extraembryonic tissue 5' read P
BY066052.1 Clone I920046K20 extraembryonic tissue 5' read P
BY067564.1 Clone I920055A17 extraembryonic tissue 5' read P
BY067603.1 Clone I920055F24 extraembryonic tissue 5' read P
BY067669.1 Clone I920055N14 extraembryonic tissue 5' read P
BY068003.1 Clone I920057K08 extraembryonic tissue 5' read P
BY068710.1 Clone I920061K19 extraembryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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