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UGID:340713     UniGene Mm.254067     Mus musculus (mouse)   H2-Ab1
Histocompatibility 2, class II antigen A, beta 1 (H2-Ab1)

Mouse protein-coding gene H2-Ab1. Represented by 581 ESTs from 60 cDNA libraries. Corresponds to reference sequence NM_207105.3. [UniGene 340713 - Mm.254067]

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; skin; mammary gland; spleen; lung; joint; intestine; embryonic tissue; pancreas; tongue; pineal gland; sympathetic ganglion; bladder; salivary gland; blood; stomach; thymus; mixed; bone marrow; kidney; liver; heart; testis; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17 B1|17 17.98 cM
UniSTS entry: Chr 17 D17Dgm2
UniSTS entry: Chr 17 AI845868
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (30)

AK077436.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730408O08 product:response to metastatic cancers 1, full insert sequence P
AF065913.1 Mus musculus strain SJL/J histocompatibility 2, class II antigen A, beta 1 (H2-Ab1) mRNA, partial cds P
AF065912.1 Mus musculus strain B10.S/J histocompatibility 2, class II antigen A, beta 1 (H2-Ab1) mRNA, partial cds P
AY303785.1 Mus musculus strain BALB.B MHC class II antigen A beta (H2-Ab) mRNA, partial cds P
AY303784.1 Mus musculus strain C57BL/Ka MHC class II antigen A beta (H2-Ab) mRNA, partial cds P
BC057998.1 Mus musculus histocompatibility 2, class II antigen A, beta 1, mRNA (cDNA clone MGC:68176 IMAGE:5340289), complete cds PA
AY452202.1 Mus musculus H-2 class II histocompatibility antigen, A-D beta chain precursor, mRNA, complete cds P
NM_207105.3 Mus musculus histocompatibility 2, class II antigen A, beta 1 (H2-Ab1), mRNA PA
AK171211.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630308L11 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK171005.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630217H05 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK170370.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101G17 product:H-2 class II histocompatibility antigen, A beta chain precursor, full insert sequence P
AK155573.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630328D14 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK172409.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830206G07 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK156899.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830106E04 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK171298.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630327F07 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK171290.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630326B10 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
AK171281.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630324N09 product:histocompatibility 2, class II antigen A, beta 1, full insert sequence P
M66213.1 Mouse MHC class II H2-IA-beta-5 mRNA, complete cds P
M15848.1 Mouse MHC class II H2-IA-beta chain (haplotype NOD) mRNA, complete cds P
M13541.1 Mouse MHC class II H2-IA-beta (f haplotype) mRNA, 3' end P
M13538.1 Mouse MHC class II H2-IA-beta (k haplotype) mRNA, complete cds P
M13537.1 Mouse MHC class II H2-IA-beta (q haplotype) mRNA, complete cds P
M13540.1 Mouse MHC class II H2-IA-beta (s haplotype) mRNA, complete cds P
M13539.1 Mouse MHC class II H2-IA-beta (u haplotype) mRNA, complete cds P
K01143.1 Mouse MHC class II H2-IA-beta gene (haplotype d) 3' end, mRNA P
M21932.1 Mouse MHC class II H2-I-A-beta gene (k haplotype), 3' end P
AF119251.1 Mus musculus MHC class II antigen IA beta 1 (H2-Ab1) mRNA, H2-Ab1-nb1 allele, complete cds P
AF119252.1 Mus musculus MHC class II antigen IA beta 1 (H2-Ab1) mRNA, H2-Ab1-nb1 allele, complete cds P
BC008168.1 Mus musculus histocompatibility 2, class II antigen A, beta 1, mRNA (cDNA clone MGC:6182 IMAGE:3257494), complete cds PA
BC010322.1 Mus musculus histocompatibility 2, class II antigen A, beta 1, mRNA (cDNA clone MGC:6297 IMAGE:2651058), complete cds PA

EST sequences (10 of 581) [Show all sequences]

BY000939.1 Clone 1210001D08 lung 5' read P
BY000949.1 Clone 1210001G02 lung 5' read P
BY005221.1 Clone F420003L15 spleen 5' read P
BY080733.1 Clone K630026N08 mixed 5' read P
BY085338.1 Clone K630052F07 mixed 5' read
BY086921.1 Clone K630063K06 spleen 5' read P
BY090026.1 Clone K630079I04 thymus 5' read P
BY094760.1 Clone K630102E21 mixed 5' read P
BY100173.1 Clone K630130M22 mixed 5' read P
BY102582.1 Clone K630145L10 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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