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UGID:337874     UniGene Mm.251228     Mus musculus (mouse)   Rtcd1 Order cDNA clone, Links
RNA terminal phosphate cyclase domain 1 (Rtcd1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_079793.1 RNA terminal phosphate cyclase domain 1 M. musculus 100.0 365
NP_003720.1 RNA terminal phosphate cyclase domain 1 isoform b H. sapiens 93.4 365
NP_001086034.1 MGC84552 protein X. laevis 80.9 350
NP_955830.1 RNA terminal phosphate cyclase domain 1 D. rerio 75.8 362

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; bone marrow; mammary gland; intestine; mixed; thymus; testis; kidney; skin; eye; joint; lung; heart; uncharacterized tissue; stomach; extraembryonic tissue; spleen; bone; inner ear; prostate; lymph node; muscle; tongue; spinal cord; bladder; dorsal root ganglion; molar; pituitary gland; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3 G1
UniSTS entry: Chr 3 AI450277
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

BC042473.1 Mus musculus RNA terminal phosphate cyclase domain 1, mRNA (cDNA clone IMAGE:5359937) A
BC051062.1 Mus musculus RNA terminal phosphate cyclase domain 1, mRNA (cDNA clone IMAGE:5359937) A
AK219075.1 Mus musculus cDNA, clone:Y2G0147E15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK215360.1 Mus musculus cDNA, clone:Y2G0134M11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK212568.1 Mus musculus cDNA, clone:Y2G0125G11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK209245.1 Mus musculus cDNA, clone:Y2G0114H06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK207601.1 Mus musculus cDNA, clone:Y2G0108I08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK193515.1 Mus musculus cDNA, clone:Y1G0112I23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK190960.1 Mus musculus cDNA, clone:Y1G0104F21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK186063.1 Mus musculus cDNA, clone:Y0G0136C10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK184643.1 Mus musculus cDNA, clone:Y0G0130P21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search
AK179135.1 Mus musculus cDNA, clone:Y0G0109E11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search P
AK178422.1 Mus musculus cDNA, clone:Y0G0106K14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search
AK177950.1 Mus musculus cDNA, clone:Y0G0104N22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000348, based on BLAT search
BC090403.1 Mus musculus RNA terminal phosphate cyclase domain 1, mRNA (cDNA clone MGC:102342 IMAGE:5293337), complete cds PA
AK159961.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041C03 product:RNA terminal phosphate cyclase domain 1, full insert sequence P
AK152129.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830048I24 product:RNA terminal phosphate cyclase domain 1, full insert sequence P
AK167830.1 Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730032A06 product:RNA terminal phosphate cyclase domain 1, full insert sequence P
AK151400.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029C20 product:RNA terminal phosphate cyclase domain 1, full insert sequence P
AK151108.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E05 product:RNA terminal phosphate cyclase domain 1, full insert sequence P
AK009245.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310009A18 product:RNA 3'-TERMINAL PHOSPHATE CYCLASE (EC 6.5.1.4) (RNA-3'-PHOSPHATE CYCLASE) (RNA CYCLASE) homolog [Homo sapiens], full insert sequence P
AK002543.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011H17 product:RNA 3'-TERMINAL PHOSPHATE CYCLASE (EC 6.5.1.4) (RNA-3'-PHOSPHATE CYCLASE) (RNA CYCLASE) homolog [Homo sapiens], full insert sequence P
BC016519.1 Mus musculus RNA terminal phosphate cyclase domain 1, mRNA (cDNA clone MGC:27879 IMAGE:3495638), complete cds PA
NM_025517.3 Mus musculus RNA terminal phosphate cyclase domain 1 (Rtcd1), mRNA PA

EST sequences (10 of 241) [Show all sequences]

BY005717.1 Clone F430107G03 spleen 5' read
BY006175.1 Clone F520005J22 kidney 5' read
BY013750.1 Clone G730041D19 lung 5' read P
BY015931.1 Clone G830015A12 mammary gland 5' read P
BY019341.1 Clone G830034N01 mammary gland 5' read P
BY020011.1 Clone G830038F21 mammary gland 5' read P
BY052563.1 Clone I730070H04 thymus 5' read P
BY080854.1 Clone K630027M12 mixed 5' read P
BY090262.1 Clone K630080K11 embryonic tissue 5' read P
BY087198.1 Clone K630064M09 heart 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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