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UGID:261892     UniGene Mm.24096     Mus musculus (mouse)   Thbd
Thrombomodulin (Thbd)

Mouse protein-coding gene Thbd. Represented by 144 ESTs from 66 cDNA libraries. Corresponds to reference sequence NM_009378.3. [UniGene 261892 - Mm.24096]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033404.1 Thbd gene product M. musculus 100.0 576
NP_000352.1 THBD gene product H. sapiens 70.6 574
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
NP_113959.1 thrombomodulin precursor R. norvegicus 87.3 576
NP_001006954.1 thrombomodulin precursor C. lupus familiaris 72.1 577

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mixed; lung; pancreas; prostate; mammary gland; connective tissue; brain; eye; heart; inner ear; lymph node; muscle; kidney; thyroid; skin; uncharacterized tissue; stomach; uterus; bladder; salivary gland; intestine; spleen; oviduct; liver; extraembryonic tissue
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2 G3|2 73.45 cM
UniSTS entry: Chr 2 AI385582
UniSTS entry: Chr 2 PMC209404P1
UniSTS entry: Chr 2 Thbd
UniSTS entry: Chr 2 X14432
UniSTS entry: Chr 2 Thbd
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK044928.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130014A08 product:THROMBOMODULIN PRECURSOR (FETOMODULIN) (TM), full insert sequence P
AK082885.1 Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430003G11 product:thrombomodulin, full insert sequence
CT010375.1 Mus musculus full open reading frame cDNA clone RZPDo836C0953D for gene Thbd, Thrombomodulin; complete cds, incl. stopcodon P
X14432.1 Mouse mRNA for thrombomodulin P
NM_009378.3 Mus musculus thrombomodulin (Thbd), mRNA PA
BC019154.1 Mus musculus thrombomodulin, mRNA (cDNA clone MGC:29138 IMAGE:5065481), complete cds PA

EST sequences (10 of 144) [Show all sequences]

BY000735.1 Clone 1020013I15 heart 5' read
BY001575.1 Clone 2124003M17 mixed 5' read P
BY007005.1 Clone G430010K05 mammary gland 5' read P
BY031812.1 Clone I1C0008H01 embryonic tissue 5' read
BY089420.1 Clone K630075M11 mixed 5' read P
BY134971.1 Clone L930053G01 embryonic tissue 5' read P
BY137015.1 Clone L930085J12 embryonic tissue 5' read P
BY137099.1 Clone L930086J02 embryonic tissue 5' read P
BY232023.1 Clone F930023D23 inner ear 5' read P
BY266547.1 Clone K430010G09 brain 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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