> ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit (Atp5b)
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UGID:326745     UniGene Mm.238973     Mus musculus (mouse)   Atp5b Order cDNA clone, Links
ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit (Atp5b)

Mouse protein-coding gene Atp5b. Represented by 4767 ESTs from 448 cDNA libraries. Corresponds to reference sequence NM_016774.3. [UniGene 326745 - Mm.238973]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_058054.2 Atp5b gene product M. musculus 100.0 528
XP_003906666.1 PREDICTED: ATP synthase subunit beta, mitochondrial P. anubis 100.0 186
NP_599191.1 Atp5b gene product R. norvegicus 99.8 528
XP_509149.2 PREDICTED: ATP synthase subunit beta, mitochondrial isoform 2 P. troglodytes 99.6 528
XP_002711130.1 PREDICTED: mitochondrial ATP synthase beta subunit O. cuniculus 99.6 527
NP_001677.2 ATP5B gene product H. sapiens 99.4 528
NP_001080126.1 mitochondrial ATP synthase beta subunit X. laevis 98.1 524
NP_001019600.2 ATP synthase subunit beta, mitochondrial D. rerio 98.1 516
NP_726631.1 ATP synthase-beta, isoform A D. melanogaster 95.8 503
NP_498111.2 Protein ATP-2 C. elegans 94.0 537
XP_963253.2 ATP synthase beta chain, mitochondrial precursor N. crassa 87.9 514
XP_001691632.1 beta subunit of mitochondrial ATP synthase C. reinhardtii 87.7 535
NP_012655.3 Atp2p S. cerevisiae 87.5 506
NP_568204.1 ATP synthase subunit beta-2 A. thaliana 86.5 554
Other hits (2 of 62) [Show all]SpeciesId(%)Len(aa)
NP_001182423.1 ATP synthase subunit beta, mitochondrial M. mulatta 99.4 528
XP_001929445.1 PREDICTED: ATP synthase subunit beta, mitochondrial S. scrofa 99.4 527

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; bone marrow; kidney; heart; mixed; eye; liver; thymus; extraembryonic tissue; lung; intestine; testis; skin; pancreas; spleen; uncharacterized tissue; ovary; bone; tongue; inner ear; salivary gland; stomach; joint; connective tissue; dorsal root ganglion; muscle; nasopharynx; prostate; olfactory mucosa; spinal cord; blood; molar; pineal gland; sympathetic ganglion; bladder; fertilized ovum; thyroid; pituitary gland; lymph node; adipose tissue; epididymis; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10 D3|10
UniSTS entry: Chr 17 D17Wsu164e
UniSTS entry: Chr 10 ATP5B
UniSTS entry: Chr 9 D10Mit157.2 [Map Viewer]
UniSTS entry: Chr 10 AW549786
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (81)

AK084009.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130076C11 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK083276.1 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630032P20 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
BC013848.1 Mus musculus cDNA clone IMAGE:3709494 A
BC013253.1 Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, mRNA (cDNA clone IMAGE:3153509) PA
BC046616.1 Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, mRNA (cDNA clone MGC:54581 IMAGE:6494223), complete cds PA
AK220050.1 Mus musculus cDNA, clone:Y2G0150J23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK220031.1 Mus musculus cDNA, clone:Y2G0150I22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK218870.1 Mus musculus cDNA, clone:Y2G0146J19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK217971.1 Mus musculus cDNA, clone:Y2G0143J16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK217965.1 Mus musculus cDNA, clone:Y2G0143J06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK217489.1 Mus musculus cDNA, clone:Y2G0141P11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK216817.1 Mus musculus cDNA, clone:Y2G0139K08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK216714.1 Mus musculus cDNA, clone:Y2G0139E13, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK215685.1 Mus musculus cDNA, clone:Y2G0135N14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK213511.1 Mus musculus cDNA, clone:Y2G0128I22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK212560.1 Mus musculus cDNA, clone:Y2G0125F24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK212143.1 Mus musculus cDNA, clone:Y2G0124A02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK205830.1 Mus musculus cDNA, clone:Y2G0102O16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK205339.1 Mus musculus cDNA, clone:Y2G0101G04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK204554.1 Mus musculus cDNA, clone:Y1G0148N10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK203708.1 Mus musculus cDNA, clone:Y1G0145N21, strand:unspecified
AK203332.1 Mus musculus cDNA, clone:Y1G0144I17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK202885.1 Mus musculus cDNA, clone:Y1G0143A16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK202420.1 Mus musculus cDNA, clone:Y1G0141H08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK201737.1 Mus musculus cDNA, clone:Y1G0139D09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK200200.1 Mus musculus cDNA, clone:Y1G0133M04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK200108.1 Mus musculus cDNA, clone:Y1G0133G18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK198620.1 Mus musculus cDNA, clone:Y1G0128L02, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK198554.1 Mus musculus cDNA, clone:Y1G0128H24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK198338.1 Mus musculus cDNA, clone:Y1G0127N19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK198015.1 Mus musculus cDNA, clone:Y1G0126N16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK196936.1 Mus musculus cDNA, clone:Y1G0123H12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK195546.1 Mus musculus cDNA, clone:Y1G0118N06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK195439.1 Mus musculus cDNA, clone:Y1G0118H23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK195031.1 Mus musculus cDNA, clone:Y1G0117D01, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK193572.1 Mus musculus cDNA, clone:Y1G0112L17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK193315.1 Mus musculus cDNA, clone:Y1G0111M24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK192149.1 Mus musculus cDNA, clone:Y1G0108A07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK191197.1 Mus musculus cDNA, clone:Y1G0105C12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search
AK190147.1 Mus musculus cDNA, clone:Y1G0101N22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK189972.1 Mus musculus cDNA, clone:Y1G0101F18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK189215.1 Mus musculus cDNA, clone:Y0G0148E21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK186165.1 Mus musculus cDNA, clone:Y0G0136H20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK183981.1 Mus musculus cDNA, clone:Y0G0128C11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK182340.1 Mus musculus cDNA, clone:Y0G0121K07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK179339.1 Mus musculus cDNA, clone:Y0G0110A10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK178407.1 Mus musculus cDNA, clone:Y0G0106J12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK178179.1 Mus musculus cDNA, clone:Y0G0105L16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026459, based on BLAT search P
AK160199.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510038G15 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK152976.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830097C05 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK148891.1 Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120460C03 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK168941.1 Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920066H16 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK152788.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830086B13 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK152730.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083E16 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK168692.1 Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920045M10 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK145684.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029F07 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK164383.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130083N01 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence PA
AK159978.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041M06 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK159737.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420029F15 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK167764.1 Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730010C20 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK167728.1 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530030E03 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK159444.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020D07 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK151600.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032B08 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK167160.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0036G07 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK167119.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0032O16 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK151081.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022K22 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK166979.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0026G14 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK150599.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830012J11 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK166603.1 Mus musculus 4 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0034N03 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK166525.1 Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0001A20 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK160608.1 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610208E22 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK153099.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830122N06 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK169184.1 Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920088E23 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AF030559.1 Mus musculus ATP synthase beta-subunit (beta-F1 ATPase) mRNA, nuclear gene encoding mitochondrial protein, complete cds PA
NM_016774.3 Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit (Atp5b), nuclear gene encoding mitochondrial protein, mRNA P
AK011035.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510031K13 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK010314.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400011D10 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK003460.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110005D21 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
AK002621.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610013B04 product:ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, full insert sequence P
BC018392.1 Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, mRNA (cDNA clone IMAGE:3588728), partial cds PA
BC037127.1 Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, mRNA (cDNA clone IMAGE:4920887), partial cds PA

EST sequences (10 of 4767) [Show all sequences]

CA565411.1 Clone NIA:K0337G07_IMAGE:30057870 bone 5' read P
CA566302.1 Clone NIA:K0349F03_IMAGE:30059006 bone 5' read P
CA567065.1 Clone NIA:K0409D07_IMAGE:30059946 bone marrow 5' read P
CA567091.1 Clone NIA:K0409F11_IMAGE:30059974 bone marrow 5' read P
CA567388.1 Clone NIA:K0413E09_IMAGE:30060344 bone marrow 5' read P
CA567537.1 Clone NIA:K0415F04_IMAGE:30060543 bone marrow 5' read P
CA568318.1 Clone NIA:K0426D05_IMAGE:30061576 bone marrow 5' read P
CA568397.1 Clone NIA:K0427D04_IMAGE:30061671 bone marrow 5' read P
CA568512.1 Clone NIA:K0428G01_IMAGE:30061800 bone marrow 5' read P
CA568548.1 Clone NIA:K0429B05_IMAGE:30061840 bone marrow 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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