> Homeobox B6 (Hoxb6)
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UGID:255820     UniGene Mm.215     Mus musculus (mouse)   Hoxb6 Order cDNA clone, Links
Homeobox B6 (Hoxb6)

Mouse protein-coding gene Hoxb6. Represented by 18 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_008269.1. [UniGene 255820 - Mm.215]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032295.1 Hoxb6 gene product M. musculus 100.0 223
XP_003752419.1 PREDICTED: homeobox protein Hox-B6 R. norvegicus 100.0 223
XP_002719359.1 PREDICTED: homeobox B6 O. cuniculus 99.5 223
NP_061825.2 HOXB6 gene product H. sapiens 98.2 223
NP_001090379.1 homeobox B6 X. laevis 79.4 222
NP_571194.1 hoxb6a gene product D. rerio 75.9 227
NP_498695.1 Protein MAB-5 C. elegans 57.0 121
NP_996219.1 ultrabithorax, isoform F D. melanogaster 54.0 211
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_003362443.1 PREDICTED: homeobox protein Hox-B6-like E. caballus 99.1 223
XP_003912726.1 PREDICTED: homeobox protein Hox-B6 P. anubis 98.7 223

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; kidney; mammary gland; mixed; heart; brain; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11 D|11 59.82 cM
UniSTS entry: Chr 11 Hoxb6
UniSTS entry: Chr 11 Hoxb6
UniSTS entry: Chr 11 Hoxb6
UniSTS entry: Chr 11 Hoxb6
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

X56459.1 Murine HOX 2.2 mRNA for a homeobox protein P
X56461.1 Murine Hox2.2 mRNA for a homeobox protein PA
AK011622.1 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610029N04 product:HOMEOBOX PROTEIN HOX-B6 (HOX-2.2) (MH-22A) homolog [Mus musculus], full insert sequence P
BC016893.1 Mus musculus homeo box B6, mRNA (cDNA clone MGC:18719 IMAGE:4223365), complete cds PA
NM_008269.1 Mus musculus homeobox B6 (Hoxb6), mRNA PA

EST sequences (10 of 18) [Show all sequences]

BY710873.1 Clone 2610029N04 embryonic tissue 5' read P
BX514677.1 Clone IMAGp998I054847_;_IMAGE:1973068 kidney P
AA008326.1 Clone IMAGE:439758 embryonic tissue 5' read
AA656200.1 Clone IMAGE:1211046 heart 5' read
AA881763.1 Clone IMAGE:1265657 mammary gland 5' read
AI385768.1 Clone IMAGE:439758 embryonic tissue 3' read A
AV022894.1 Clone 1190029P07 embryonic tissue
AV023717.1 Clone 1190033I18 embryonic tissue
AI788354.1 Clone IMAGE:1973068 kidney 5' read P
AI894040.1 Clone IMAGE:439758 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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