Neurotrophin 5 (Ntf5)

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Finding cDNAs

UGID:260467 UniGene Mm.20344 Mus musculus (mouse) Ntf5

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Neurotrophin 5 (Ntf5)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_937833.1	neurotrophin 5 precursor	M. musculus	100.0	208
NP_006170.1	neurotrophin 5 preproprotein	H. sapiens	93.8	209
NP_571670.2	brain-derived neurotrophic factor	D. rerio	51.9	159
NP_001078951.1	brain-derived neurotrophic factor	X. laevis	51.9	159

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	embryonic tissue; brain; lung; inner ear

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	7
Map position:	7 B4\|7 23.0 cM
UniSTS entry:	Chr 7	AI462899

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK019330.1	Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900040K06 product:unclassifiable, full insert sequence
BC052191.1	Mus musculus neurotrophin 5, mRNA (cDNA clone MGC:59562 IMAGE:6505258), complete cds	PA
NM_198190.1	Mus musculus neurotrophin 5 (Ntf5), mRNA	PA

EST sequences (9)

BY712596.1	Clone 2900040K06	brain	5' read	A
AA271974.1	Clone IMAGE:763187	embryonic tissue	5' read
AI322264.1	Clone IMAGE:333685	embryonic tissue	5' read	P
AI324705.1	Clone IMAGE:333685	embryonic tissue	3' read	A
AV136460.1	Clone 2810026L12	embryonic tissue
AI595076.1	Clone IMAGE:763187	embryonic tissue	5' read
BI151364.1	Clone IMAGE:5067613	lung	5' read	M
BQ895312.1	Clone IMAGE:6393938	inner ear	5' read	PM
BU510565.1	Clone IMAGE:6505258	embryonic tissue	5' read	PM

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria