> Transcribed locus, strongly similar to NP_033739.1 actin, cytoplasmic 2 [Mus musculus]
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UGID:304868     UniGene Mm.196173     Mus musculus (mouse)   Links
Transcribed locus, strongly similar to NP_033739.1 actin, cytoplasmic 2 [Mus musculus]

Mouse protein-coding gene. Represented by 2071 ESTs from 260 cDNA libraries. [UniGene 304868 - Mm.196173]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002195916.1 PREDICTED: actin, cytoplasmic type 5-like T. guttata 100.0 375
NP_033739.1 actin, cytoplasmic 2 M. musculus 100.0 374
NP_001120921.1 actin, cytoplasmic 2 R. norvegicus 100.0 374
XP_001370868.1 PREDICTED: actin, cytoplasmic 2 M. domestica 100.0 374
XP_003964470.1 PREDICTED: actin, cytoplasmic 1-like T. rubripes 100.0 374
XP_004066026.1 PREDICTED: actin, cytoplasmic 2-like O. latipes 100.0 374
XP_003443175.1 PREDICTED: actin, cytoplasmic 1 O. niloticus 100.0 374
NP_001091279.1 actin, cytoplasmic 2 X. laevis 100.0 374
NP_989332.1 actg1 gene product X. tropicalis 100.0 374
XP_001236316.2 PREDICTED: actin, cytoplasmic 2-like G. gallus 100.0 374
XP_003210639.1 PREDICTED: actin, cytoplasmic 1 M. gallopavo 100.0 374
XP_003428315.1 PREDICTED: actin, cytoplasmic 1-like isoform 2 O. anatinus 100.0 374
XP_002802769.1 PREDICTED: actin, cytoplasmic 1-like isoform 1 M. mulatta 100.0 374
XP_003913607.1 PREDICTED: actin, cytoplasmic 2 P. anubis 100.0 374
NP_001009945.1 ACTB gene product P. troglodytes 100.0 374
NP_001186883.1 ACTG1 gene product H. sapiens 100.0 374
NP_001182774.1 actin, cytoplasmic 1 C. lupus familiaris 100.0 374
XP_001488933.1 PREDICTED: actin, cytoplasmic 2 E. caballus 100.0 374
XP_003357976.1 PREDICTED: actin, cytoplasmic 2 S. scrofa 100.0 374
NP_001028790.1 ACTG1 gene product B. taurus 100.0 374
XP_004013127.1 PREDICTED: actin, cytoplasmic 2 O. aries 100.0 374
NP_001095153.1 ACTB gene product O. cuniculus 100.0 374
XP_003228820.1 PREDICTED: actin, cytoplasmic type 5-like A. carolinensis 99.7 375
XP_003396989.1 PREDICTED: actin-5C-like isoform 1 B. terrestris 99.7 375
NP_508841.1 Protein ACT-4, isoform a C. elegans 99.7 375
NP_001119672.1 LOC100145822 gene product A. pisum 99.7 375
NP_001165843.1 actin related protein 1 T. castaneum 99.7 375
NP_001119727.1 actin, cytoplasmic A4 B. mori 99.7 375
XP_001655175.1 actin A. aegypti 99.7 375
XP_001230772.1 AGAP000651-PA A. gambiae 99.7 375
XP_001870756.1 conserved hypothetical protein C. quinquefasciatus 99.7 375
NP_511052.1 actin 5C, isoform B D. melanogaster 99.7 375
XP_002106247.1 GD16764 D. simulans 99.7 375
NP_001157191.1 Arp1 gene product N. vitripennis 99.7 375
NP_571106.1 actb1 gene product D. rerio 99.7 374
NP_001117707.1 actin beta O. mykiss 99.7 374
NP_001116997.1 actin, cytoplasmic 1 S. salar 99.7 374
NP_001172074.1 actin related protein 1 A. mellifera 99.7 373
XP_002408110.1 actin, putative I. scapularis 99.7 334
XP_001699068.1 actin C. reinhardtii 95.5 376
NP_187818.1 actin-11 A. thaliana 95.5 376
NP_116614.1 actin S. cerevisiae 93.9 374
XP_961133.2 actin N. crassa 93.3 374
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
NP_001158422.1 act1 gene product S. kowalevskii 99.5 375
XP_001637076.1 predicted protein N. vectensis 99.5 374

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mammary gland; embryonic tissue; kidney; brain; mixed; lung; eye; bone marrow; extraembryonic tissue; inner ear; intestine; nasopharynx; bone; heart; pancreas; dorsal root ganglion; liver; prostate; testis; salivary gland; spinal cord; uncharacterized tissue; bladder; muscle; spleen; ovary; thyroid; stomach; pineal gland; uterus; thymus; pituitary gland; joint; connective tissue; blood; skin; fertilized ovum; tongue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
UniSTS entry: Chr 4 PMC97568P1
UniSTS entry: Chr 4 PMC137792P1
UniSTS entry: Chr 9 PMC201106P1
UniSTS entry: Chr 9 RH125445
UniSTS entry: Chr 9 PMC23952P1
UniSTS entry: Chr 4 RH128697
UniSTS entry: Chr 9 PMC22644P1
UniSTS entry: Chr 9 PMC109689P1
UniSTS entry: Chr 9 PMC110200P1
UniSTS entry: Chr X PMC33279P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK185053.1 Mus musculus cDNA, clone:Y0G0132H08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000062431, based on BLAT search
AK150209.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530144K08 product:actin, gamma, cytoplasmic, full insert sequence P
AK149927.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106D06 product:actin, gamma, cytoplasmic, full insert sequence P

EST sequences (10 of 2071) [Show all sequences]

CA563384.1 Clone NIA:K0313C10_IMAGE:30055521 bone 5' read P
CA563547.1 Clone NIA:K0315B11_IMAGE:30055702 bone 5' read P
CA563967.1 Clone NIA:K0320C04_IMAGE:30056187 bone 5' read P
CA564148.1 Clone NIA:K0322F12_IMAGE:30056423 bone 5' read P
CA564638.1 Clone NIA:K0328E09_IMAGE:30056984 bone 5' read P
CA564733.1 Clone NIA:K0329F02_IMAGE:30057085 bone 5' read P
CA564826.1 Clone NIA:K0330F10_IMAGE:30057189 bone 5' read P
CA565192.1 Clone NIA:K0335A08_IMAGE:30057607 bone 5' read P
CA565223.1 Clone NIA:K0335D07_IMAGE:30057642 bone 5' read P
CA565447.1 Clone NIA:K0338C06_IMAGE:30057917 bone 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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