> Lymphocyte cytosolic protein 1 (Lcp1)
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UGID:293877     UniGene Mm.153911     Mus musculus (mouse)   Lcp1 Order cDNA clone, Links
Lymphocyte cytosolic protein 1 (Lcp1)

Mouse protein-coding gene Lcp1. Represented by 602 ESTs from 125 cDNA libraries. EST representation biased toward blastocyst. Corresponds to 2 reference sequences (different isoforms). [UniGene 293877 - Mm.153911]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032905.2 Lcp1 gene product M. musculus 100.0 626
NP_001012044.1 Lcp1 gene product R. norvegicus 99.7 626
NP_002289.2 plastin-2 H. sapiens 98.4 626
NP_001080219.2 lymphocyte cytosolic protein 1 (L-plastin) X. laevis 92.1 620
NP_571395.1 lcp1 gene product D. rerio 88.6 623
NP_523385.1 fimbrin, isoform A D. melanogaster 63.3 626
NP_500061.4 Protein PLST-1 C. elegans 59.4 394
XP_956577.2 fimbrin N. crassa 47.2 642
NP_010414.3 Sac6p S. cerevisiae 45.9 638
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001490638.1 PREDICTED: plastin-2 E. caballus 98.9 626
XP_002712998.1 PREDICTED: plastin 3-like O. cuniculus 98.9 626

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: blastocyst [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bone marrow; embryonic tissue; spleen; mixed; extraembryonic tissue; thymus; bone; mammary gland; uncharacterized tissue; joint; blood; brain; kidney; heart; skin; eye; bladder; lung; dorsal root ganglion; salivary gland; pineal gland; pancreas; liver; testis; inner ear; tongue; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14 D3|14 39.63 cM
UniSTS entry: Chr 14 RH126802
UniSTS entry: Chr 14 AW536232
UniSTS entry: Lcp1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (25)

AK088202.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007D02 product:plastin 2, L, full insert sequence P
AK030996.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830483L22 product:plastin 2, L, full insert sequence P
AK030987.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830476K24 product:plastin 2, L, full insert sequence P
AK089922.1 Mus musculus RCB-0035 WEHI-3 cDNA, RIKEN full-length enriched library, clone:G430003K04 product:plastin 2, L, full insert sequence P
BC071248.1 Mus musculus cDNA clone IMAGE:4037406, partial cds A
AK152902.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089L24 product:lymphocyte cytosolic protein 1, full insert sequence P
AK152891.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089H16 product:lymphocyte cytosolic protein 1, full insert sequence P
AK152668.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830082D05 product:lymphocyte cytosolic protein 1, full insert sequence P
AK149790.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530017E13 product:lymphocyte cytosolic protein 1, full insert sequence P
AK151720.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830035F03 product:lymphocyte cytosolic protein 1, full insert sequence P
AK151542.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031I19 product:lymphocyte cytosolic protein 1, full insert sequence P
AK167261.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0047H03 product:lymphocyte cytosolic protein 1, full insert sequence P
AK151155.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830026C04 product:lymphocyte cytosolic protein 1, full insert sequence P
AK151137.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025L21 product:unclassifiable, full insert sequence
AK030806.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830409D16 product:lymphocyte cytosolic protein 1, full insert sequence P
AK169833.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430033O10 product:lymphocyte cytosolic protein 1, full insert sequence P
AK169728.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430013P16 product:lymphocyte cytosolic protein 1, full insert sequence P
AK153206.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127G09 product:lymphocyte cytosolic protein 1, full insert sequence P
AK153082.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830121J02 product:lymphocyte cytosolic protein 1, full insert sequence P
AK153061.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120E22 product:lymphocyte cytosolic protein 1, full insert sequence P
NM_001247984.1 Mus musculus lymphocyte cytosolic protein 1 (Lcp1), transcript variant 1, mRNA PA
D37837.1 Mus musculus mRNA for 65-kDa macrophage cytosolic protein, complete cds P
NM_008879.4 Mus musculus lymphocyte cytosolic protein 1 (Lcp1), transcript variant 2, mRNA PA
AK009211.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310007K12 product:plastin 2, L, full insert sequence P
BC022943.1 Mus musculus lymphocyte cytosolic protein 1, mRNA (cDNA clone MGC:30234 IMAGE:3486993), complete cds PA

EST sequences (10 of 602) [Show all sequences]

CA570627.1 Clone NIA:K0508G09_IMAGE:30064688 bone marrow 5' read P
CA573759.1 Clone NIA:K0605D08_IMAGE:30069259 bone marrow 5' read
CA574578.1 Clone NIA:K0618C12_IMAGE:30070499 bone marrow 5' read P
CA574960.1 Clone NIA:K0623E10_IMAGE:30071001 bone marrow 5' read P
CA575269.1 Clone NIA:K0628A11_IMAGE:30071434 bone marrow 5' read P
CA576916.1 Clone NIA:K0701H11_IMAGE:30073726 bone marrow 5' read
CA577438.1 Clone NIA:K0709E07_IMAGE:30074454 bone marrow 5' read P
CA578348.1 Clone NIA:K0722D10_IMAGE:30075693 bone marrow 5' read P
CA578631.1 Clone NIA:K0726E11_IMAGE:30076090 bone marrow 5' read P
CA578988.1 Clone NIA:K0731C05_IMAGE:30076540 bone marrow 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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