> Tumor necrosis factor (Tnf)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:256267     UniGene Mm.1293     Mus musculus (mouse)   Tnf Order cDNA clone, Links
Tumor necrosis factor (Tnf)

Mouse protein-coding gene Tnf. Represented by 99 ESTs from 17 cDNA libraries. Corresponds to reference sequence NM_013693.2. [UniGene 256267 - Mm.1293]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_038721.1 Tnf gene product M. musculus 100.0 234
NP_000585.2 TNF gene product H. sapiens 82.8 232
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
NP_036807.1 Tnf gene product R. norvegicus 95.3 234
NP_001003244.4 TNF gene product C. lupus familiaris 83.3 232

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bone marrow; spleen; uncharacterized tissue; mammary gland; skin; joint; embryonic tissue; mixed; lymph node; thymus; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17 B1|17 18.59 cM
UniSTS entry: Chr 17 AW824221
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 PMC112151P1
UniSTS entry: Chr 17 PMC116546P1
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 Tnf
UniSTS entry: Chr 17 Tnf
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AY423855.1 Mus musculus tumor necrosis factor alpha (Tnf) mRNA, partial cds P
AK155964.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830002F15 product:tumor necrosis factor, full insert sequence P
AK154223.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630010J11 product:tumor necrosis factor, full insert sequence P
AK153800.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630097B05 product:tumor necrosis factor, full insert sequence P
AK153319.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830138A10 product:tumor necrosis factor, full insert sequence P
BC117057.1 Mus musculus tumor necrosis factor, mRNA (cDNA clone MGC:151434 IMAGE:40126376), complete cds P
BC137720.1 Mus musculus tumor necrosis factor, mRNA (cDNA clone MGC:169344 IMAGE:8860739), complete cds P
X02611.1 Mouse mRNA for tumour necrosis factor (TNF) P
M13049.1 Mouse tumor necrosis factor (TNF) mRNA, complete cds P
M11731.1 Mouse tumor necrosis factor (MuTNF) mRNA, complete cds P
NM_013693.2 Mus musculus tumor necrosis factor (Tnf), mRNA P

EST sequences (10 of 99) [Show all sequences]

BY023057.1 Clone G930015B16 mammary gland 5' read P
BY023624.1 Clone G930017M24 mammary gland 5' read P
BY024649.1 Clone G930024C03 mammary gland 5' read P
BY025245.1 Clone G930029L15 mammary gland 5' read P
BY027835.1 Clone G930045N23 mammary gland 5' read P
BY028457.1 Clone G930049H05 mammary gland 5' read P
BY155972.1 Clone I830005M24 bone marrow 5' read
BY158386.1 Clone I830017L08 bone marrow 5' read
BY160469.1 Clone I830028J08 bone marrow 5' read P
BY162162.1 Clone I830037N02 bone marrow 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help